Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 MIR6786-201ENST00000616843 113 ntBASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 TFP1-202ENST00000475455 1573 ntBASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 RN7SL850P-201ENST00000579959 291 ntBASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.25■■□□□ 1.31
SHROOM1Q2M3G4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 MIR1238-201ENST00000408483 83 ntBASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.24■■□□□ 1.31
SHROOM1Q2M3G4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 AP006587.1-201ENST00000534129 1502 ntBASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 MESTP1-201ENST00000404287 994 ntBASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHROOM1Q2M3G4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 C1QL1P1-201ENST00000568105 661 ntBASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SHROOM1Q2M3G4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 KSR1P1-201ENST00000446298 240 ntBASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 AC116562.2-201ENST00000507042 360 ntBASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 KRT16P1-201ENST00000399124 1418 ntBASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHROOM1Q2M3G4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHROOM1Q2M3G4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.2■■□□□ 1.3
SHROOM1Q2M3G4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHROOM1Q2M3G4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.2■■□□□ 1.3
SHROOM1Q2M3G4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.2■■□□□ 1.3
SHROOM1Q2M3G4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHROOM1Q2M3G4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHROOM1Q2M3G4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms