Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.92■□□□□ 0.46
RPS4XP62701 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RPS4XP62701 KRT18P29-201ENST00000397031 1267 ntBASIC17.92■□□□□ 0.46
RPS4XP62701 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS4XP62701 AC023632.3-201ENST00000521633 145 ntBASIC17.92■□□□□ 0.46
RPS4XP62701 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.92■□□□□ 0.46
RPS4XP62701 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.92■□□□□ 0.46
RPS4XP62701 C2orf69P4-201ENST00000565394 541 ntBASIC17.92■□□□□ 0.46
RPS4XP62701 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RPS4XP62701 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.92■□□□□ 0.46
RPS4XP62701 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.92■□□□□ 0.46
RPS4XP62701 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS4XP62701 KRT17P1-201ENST00000399211 1546 ntBASIC17.92■□□□□ 0.46
RPS4XP62701 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.91■□□□□ 0.46
RPS4XP62701 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.91■□□□□ 0.46
RPS4XP62701 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPS4XP62701 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.91■□□□□ 0.46
RPS4XP62701 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.91■□□□□ 0.46
RPS4XP62701 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
RPS4XP62701 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4XP62701 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPS4XP62701 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.9■□□□□ 0.46
RPS4XP62701 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS4XP62701 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 AC116562.4-201ENST00000641316 2276 ntBASIC17.9■□□□□ 0.46
RPS4XP62701 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.9■□□□□ 0.46
RPS4XP62701 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS4XP62701 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 HLA-G-202ENST00000376815 851 ntBASIC17.9■□□□□ 0.46
RPS4XP62701 HLA-G-203ENST00000376818 1127 ntBASIC17.9■□□□□ 0.46
RPS4XP62701 AC097658.1-201ENST00000475555 843 ntBASIC17.9■□□□□ 0.46
RPS4XP62701 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS4XP62701 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.9■□□□□ 0.46
RPS4XP62701 ITM2C-210ENST00000620962 501 ntBASIC17.9■□□□□ 0.46
RPS4XP62701 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 AP001271.2-201ENST00000624018 1556 ntBASIC17.9■□□□□ 0.46
RPS4XP62701 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.9■□□□□ 0.46
RPS4XP62701 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.9■□□□□ 0.46
RPS4XP62701 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4XP62701 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RPS4XP62701 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RPS4XP62701 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPS4XP62701 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPS4XP62701 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.89■□□□□ 0.46
RPS4XP62701 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RPS4XP62701 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS4XP62701 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS4XP62701 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS4XP62701 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS4XP62701 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS4XP62701 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4XP62701 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
RPS4XP62701 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.88■□□□□ 0.45
RPS4XP62701 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RPS4XP62701 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.88■□□□□ 0.45
RPS4XP62701 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms