Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 KRT16P5-201ENST00000455284 522 ntBASIC19.59■□□□□ 0.73
SRP54P61011 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP54P61011 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SRP54P61011 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRP54P61011 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.59■□□□□ 0.73
SRP54P61011 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SRP54P61011 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP54P61011 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP54P61011 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP54P61011 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
SRP54P61011 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRP54P61011 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SRP54P61011 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.58■□□□□ 0.73
SRP54P61011 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.58■□□□□ 0.73
SRP54P61011 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRP54P61011 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SRP54P61011 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SRP54P61011 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.58■□□□□ 0.72
SRP54P61011 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.58■□□□□ 0.72
SRP54P61011 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
SRP54P61011 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.58■□□□□ 0.72
SRP54P61011 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.58■□□□□ 0.72
SRP54P61011 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.58■□□□□ 0.72
SRP54P61011 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.58■□□□□ 0.72
SRP54P61011 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SRP54P61011 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP54P61011 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SRP54P61011 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.57■□□□□ 0.72
SRP54P61011 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 TSPY7P-201ENST00000431358 1114 ntBASIC19.57■□□□□ 0.72
SRP54P61011 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.57■□□□□ 0.72
SRP54P61011 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SRP54P61011 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.57■□□□□ 0.72
SRP54P61011 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SRP54P61011 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.57■□□□□ 0.72
SRP54P61011 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.57■□□□□ 0.72
SRP54P61011 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP54P61011 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.56■□□□□ 0.72
SRP54P61011 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.56■□□□□ 0.72
SRP54P61011 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SRP54P61011 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.56■□□□□ 0.72
SRP54P61011 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.56■□□□□ 0.72
SRP54P61011 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.56■□□□□ 0.72
SRP54P61011 AC004264.1-201ENST00000608354 794 ntBASIC19.56■□□□□ 0.72
SRP54P61011 AC113410.3-201ENST00000623366 203 ntBASIC19.56■□□□□ 0.72
SRP54P61011 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.56■□□□□ 0.72
SRP54P61011 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SRP54P61011 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SRP54P61011 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SRP54P61011 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRP54P61011 KRT17P2-201ENST00000300992 1314 ntBASIC19.55■□□□□ 0.72
SRP54P61011 HTR7P1-201ENST00000538670 1336 ntBASIC19.55■□□□□ 0.72
SRP54P61011 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.55■□□□□ 0.72
SRP54P61011 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SRP54P61011 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SRP54P61011 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 KRT16P6-202ENST00000425692 1426 ntBASIC19.55■□□□□ 0.72
SRP54P61011 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SRP54P61011 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.55■□□□□ 0.72
SRP54P61011 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.55■□□□□ 0.72
SRP54P61011 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SRP54P61011 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SRP54P61011 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.55■□□□□ 0.72
SRP54P61011 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRP54P61011 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRP54P61011 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SRP54P61011 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRP54P61011 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms