Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.99■□□□□ 0.63
VSX2P58304 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.99■□□□□ 0.63
VSX2P58304 AL023875.1-201ENST00000640777 796 ntBASIC18.99■□□□□ 0.63
VSX2P58304 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VSX2P58304 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VSX2P58304 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.98■□□□□ 0.63
VSX2P58304 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VSX2P58304 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.98■□□□□ 0.63
VSX2P58304 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.98■□□□□ 0.63
VSX2P58304 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 AL359736.2-201ENST00000621992 437 ntBASIC18.98■□□□□ 0.63
VSX2P58304 FAM197Y4-202ENST00000622692 608 ntBASIC18.98■□□□□ 0.63
VSX2P58304 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VSX2P58304 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
VSX2P58304 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.98■□□□□ 0.63
VSX2P58304 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VSX2P58304 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.98■□□□□ 0.63
VSX2P58304 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
VSX2P58304 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.98■□□□□ 0.63
VSX2P58304 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.97■□□□□ 0.63
VSX2P58304 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
VSX2P58304 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.97■□□□□ 0.63
VSX2P58304 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.97■□□□□ 0.63
VSX2P58304 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VSX2P58304 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.97■□□□□ 0.63
VSX2P58304 PRKY-204ENST00000533551 1019 ntBASIC18.97■□□□□ 0.63
VSX2P58304 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.97■□□□□ 0.63
VSX2P58304 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.97■□□□□ 0.63
VSX2P58304 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.97■□□□□ 0.63
VSX2P58304 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 AL121829.2-201ENST00000620908 328 ntBASIC18.97■□□□□ 0.63
VSX2P58304 AL121906.2-201ENST00000621597 723 ntBASIC18.97■□□□□ 0.63
VSX2P58304 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.97■□□□□ 0.63
VSX2P58304 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.97■□□□□ 0.63
VSX2P58304 AL391422.3-201ENST00000603791 2761 ntBASIC18.97■□□□□ 0.63
VSX2P58304 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VSX2P58304 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
VSX2P58304 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.97■□□□□ 0.63
VSX2P58304 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
VSX2P58304 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.96■□□□□ 0.63
VSX2P58304 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.96■□□□□ 0.63
VSX2P58304 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
VSX2P58304 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VSX2P58304 AC239809.2-201ENST00000415381 517 ntBASIC18.96■□□□□ 0.63
VSX2P58304 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.96■□□□□ 0.63
VSX2P58304 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.96■□□□□ 0.63
VSX2P58304 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.96■□□□□ 0.63
VSX2P58304 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
VSX2P58304 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.96■□□□□ 0.63
VSX2P58304 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
VSX2P58304 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.96■□□□□ 0.63
VSX2P58304 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.96■□□□□ 0.63
VSX2P58304 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.96■□□□□ 0.63
VSX2P58304 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 BX119927.1-201ENST00000636596 1552 ntBASIC18.96■□□□□ 0.63
VSX2P58304 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.96■□□□□ 0.63
VSX2P58304 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VSX2P58304 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.96■□□□□ 0.63
VSX2P58304 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSX2P58304 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VSX2P58304 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.95■□□□□ 0.62
VSX2P58304 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.95■□□□□ 0.62
VSX2P58304 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 KRASP1-201ENST00000407852 552 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms