Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.33■□□□□ 0.68
AP1S2P56377 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.33■□□□□ 0.68
AP1S2P56377 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.33■□□□□ 0.68
AP1S2P56377 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.33■□□□□ 0.68
AP1S2P56377 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
AP1S2P56377 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 AFG3L1P-217ENST00000557444 2447 ntBASIC19.33■□□□□ 0.68
AP1S2P56377 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.33■□□□□ 0.68
AP1S2P56377 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
AP1S2P56377 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
AP1S2P56377 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S2P56377 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.32■□□□□ 0.68
AP1S2P56377 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.32■□□□□ 0.68
AP1S2P56377 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.32■□□□□ 0.68
AP1S2P56377 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.32■□□□□ 0.68
AP1S2P56377 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.32■□□□□ 0.68
AP1S2P56377 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.32■□□□□ 0.68
AP1S2P56377 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.32■□□□□ 0.68
AP1S2P56377 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.32■□□□□ 0.68
AP1S2P56377 AC098934.4-201ENST00000564127 592 ntBASIC19.32■□□□□ 0.68
AP1S2P56377 AC060766.5-201ENST00000590539 871 ntBASIC19.32■□□□□ 0.68
AP1S2P56377 AC083880.1-201ENST00000608266 535 ntBASIC19.32■□□□□ 0.68
AP1S2P56377 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
AP1S2P56377 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.32■□□□□ 0.68
AP1S2P56377 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S2P56377 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S2P56377 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.31■□□□□ 0.68
AP1S2P56377 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.31■□□□□ 0.68
AP1S2P56377 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S2P56377 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.31■□□□□ 0.68
AP1S2P56377 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.31■□□□□ 0.68
AP1S2P56377 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.31■□□□□ 0.68
AP1S2P56377 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.31■□□□□ 0.68
AP1S2P56377 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.31■□□□□ 0.68
AP1S2P56377 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S2P56377 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
AP1S2P56377 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S2P56377 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S2P56377 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.31■□□□□ 0.68
AP1S2P56377 AC092368.3-202ENST00000574180 1591 ntBASIC19.31■□□□□ 0.68
AP1S2P56377 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S2P56377 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
AP1S2P56377 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
AP1S2P56377 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
AP1S2P56377 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.3■□□□□ 0.68
AP1S2P56377 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
AP1S2P56377 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
AP1S2P56377 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.3■□□□□ 0.68
AP1S2P56377 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.3■□□□□ 0.68
AP1S2P56377 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.3■□□□□ 0.68
AP1S2P56377 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.3■□□□□ 0.68
AP1S2P56377 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
AP1S2P56377 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S2P56377 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S2P56377 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
AP1S2P56377 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.29■□□□□ 0.68
AP1S2P56377 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 HLA-L-209ENST00000420110 1011 ntBASIC19.29■□□□□ 0.68
AP1S2P56377 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S2P56377 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.29■□□□□ 0.68
AP1S2P56377 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
AP1S2P56377 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S2P56377 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms