Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXG1P55316 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXG1P55316 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXG1P55316 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXG1P55316 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXG1P55316 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
FOXG1P55316 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXG1P55316 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXG1P55316 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 AL121829.2-201ENST00000620908 328 ntBASIC17.43■□□□□ 0.38
FOXG1P55316 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXG1P55316 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXG1P55316 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXG1P55316 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
FOXG1P55316 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FOXG1P55316 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXG1P55316 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXG1P55316 KRASP1-201ENST00000407852 552 ntBASIC17.42■□□□□ 0.38
FOXG1P55316 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXG1P55316 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXG1P55316 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.42■□□□□ 0.38
FOXG1P55316 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXG1P55316 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXG1P55316 AC124016.1-201ENST00000609552 612 ntBASIC17.42■□□□□ 0.38
FOXG1P55316 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FOXG1P55316 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXG1P55316 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
FOXG1P55316 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXG1P55316 AC018553.1-201ENST00000616682 1458 ntBASIC17.42■□□□□ 0.38
FOXG1P55316 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
FOXG1P55316 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
FOXG1P55316 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FOXG1P55316 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXG1P55316 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
FOXG1P55316 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 PHGDH-210ENST00000641115 1638 ntBASIC17.41■□□□□ 0.38
FOXG1P55316 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXG1P55316 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.41■□□□□ 0.38
FOXG1P55316 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.41■□□□□ 0.38
FOXG1P55316 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXG1P55316 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXG1P55316 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
FOXG1P55316 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FOXG1P55316 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXG1P55316 AC116351.2-201ENST00000606540 1585 ntBASIC17.4■□□□□ 0.38
FOXG1P55316 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FOXG1P55316 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXG1P55316 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXG1P55316 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXG1P55316 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.4■□□□□ 0.38
FOXG1P55316 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.4■□□□□ 0.38
FOXG1P55316 AC239809.2-201ENST00000415381 517 ntBASIC17.4■□□□□ 0.38
FOXG1P55316 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXG1P55316 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.4■□□□□ 0.38
FOXG1P55316 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.4■□□□□ 0.38
FOXG1P55316 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.4■□□□□ 0.38
FOXG1P55316 AL121906.2-201ENST00000621597 723 ntBASIC17.4■□□□□ 0.38
FOXG1P55316 TCF3P1-201ENST00000423021 1937 ntBASIC17.4■□□□□ 0.38
FOXG1P55316 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms