Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 AL353807.1-201ENST00000427475 662 ntBASIC14.57□□□□□ -0.08
APOC4P55056 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC4P55056 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
APOC4P55056 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC4P55056 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.57□□□□□ -0.08
APOC4P55056 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC4P55056 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC4P55056 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
APOC4P55056 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC4P55056 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
APOC4P55056 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC4P55056 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.57□□□□□ -0.08
APOC4P55056 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
APOC4P55056 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
APOC4P55056 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.56□□□□□ -0.08
APOC4P55056 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC4P55056 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.56□□□□□ -0.08
APOC4P55056 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC4P55056 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 KRT16P5-201ENST00000455284 522 ntBASIC14.56□□□□□ -0.08
APOC4P55056 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.56□□□□□ -0.08
APOC4P55056 RARRES2P10-201ENST00000564312 460 ntBASIC14.56□□□□□ -0.08
APOC4P55056 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.56□□□□□ -0.08
APOC4P55056 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
APOC4P55056 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 AC124283.5-201ENST00000624661 1809 ntBASIC14.56□□□□□ -0.08
APOC4P55056 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.56□□□□□ -0.08
APOC4P55056 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
APOC4P55056 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
APOC4P55056 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC4P55056 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.55□□□□□ -0.08
APOC4P55056 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.55□□□□□ -0.08
APOC4P55056 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APOC4P55056 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APOC4P55056 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC4P55056 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.55□□□□□ -0.08
APOC4P55056 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
APOC4P55056 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC4P55056 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC4P55056 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC4P55056 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC4P55056 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
APOC4P55056 RPS2P55-201ENST00000397318 883 ntBASIC14.54□□□□□ -0.08
APOC4P55056 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 AC107956.1-201ENST00000494359 873 ntBASIC14.54□□□□□ -0.08
APOC4P55056 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC4P55056 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC4P55056 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC4P55056 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC4P55056 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.54□□□□□ -0.08
APOC4P55056 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC4P55056 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
APOC4P55056 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC4P55056 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
APOC4P55056 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms