Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN3P54252 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.2■□□□□ 0.82
ATXN3P54252 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.2■□□□□ 0.82
ATXN3P54252 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
ATXN3P54252 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.2■□□□□ 0.82
ATXN3P54252 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN3P54252 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3P54252 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATXN3P54252 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.19■□□□□ 0.82
ATXN3P54252 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.19■□□□□ 0.82
ATXN3P54252 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 AC133681.1-201ENST00000465482 601 ntBASIC20.19■□□□□ 0.82
ATXN3P54252 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN3P54252 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.19■□□□□ 0.82
ATXN3P54252 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATXN3P54252 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATXN3P54252 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.18■□□□□ 0.82
ATXN3P54252 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
ATXN3P54252 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.18■□□□□ 0.82
ATXN3P54252 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
ATXN3P54252 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ATXN3P54252 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.18■□□□□ 0.82
ATXN3P54252 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 KRASP1-201ENST00000407852 552 ntBASIC20.18■□□□□ 0.82
ATXN3P54252 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 AC087499.1-201ENST00000418141 1075 ntBASIC20.18■□□□□ 0.82
ATXN3P54252 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.18■□□□□ 0.82
ATXN3P54252 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.18■□□□□ 0.82
ATXN3P54252 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.18■□□□□ 0.82
ATXN3P54252 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.18■□□□□ 0.82
ATXN3P54252 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.18■□□□□ 0.82
ATXN3P54252 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 AC116050.2-201ENST00000612102 1779 ntBASIC20.18■□□□□ 0.82
ATXN3P54252 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN3P54252 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN3P54252 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ATXN3P54252 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.17■□□□□ 0.82
ATXN3P54252 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATXN3P54252 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.17■□□□□ 0.82
ATXN3P54252 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ATXN3P54252 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 AL390719.1-204ENST00000412397 1219 ntBASIC20.17■□□□□ 0.82
ATXN3P54252 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.17■□□□□ 0.82
ATXN3P54252 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.17■□□□□ 0.82
ATXN3P54252 AC120498.8-201ENST00000614275 531 ntBASIC20.17■□□□□ 0.82
ATXN3P54252 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.17■□□□□ 0.82
ATXN3P54252 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATXN3P54252 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
ATXN3P54252 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN3P54252 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.17■□□□□ 0.82
ATXN3P54252 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms