Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEK3P51956 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.44■□□□□ 0.86
NEK3P51956 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.43■□□□□ 0.86
NEK3P51956 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.43■□□□□ 0.86
NEK3P51956 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.43■□□□□ 0.86
NEK3P51956 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.43■□□□□ 0.86
NEK3P51956 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NEK3P51956 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NEK3P51956 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.43■□□□□ 0.86
NEK3P51956 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NEK3P51956 AC006058.3-201ENST00000606217 1069 ntBASIC20.43■□□□□ 0.86
NEK3P51956 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.43■□□□□ 0.86
NEK3P51956 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.43■□□□□ 0.86
NEK3P51956 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK3P51956 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
NEK3P51956 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NEK3P51956 SMG8-203ENST00000578922 2178 ntBASIC20.42■□□□□ 0.86
NEK3P51956 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.42■□□□□ 0.86
NEK3P51956 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.42■□□□□ 0.86
NEK3P51956 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.42■□□□□ 0.86
NEK3P51956 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.42■□□□□ 0.86
NEK3P51956 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
NEK3P51956 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NEK3P51956 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.42■□□□□ 0.86
NEK3P51956 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK3P51956 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.41■□□□□ 0.86
NEK3P51956 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NEK3P51956 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
NEK3P51956 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.41■□□□□ 0.86
NEK3P51956 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.41■□□□□ 0.86
NEK3P51956 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.41■□□□□ 0.86
NEK3P51956 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.41■□□□□ 0.86
NEK3P51956 MIR2861-201ENST00000636310 90 ntBASIC20.41■□□□□ 0.86
NEK3P51956 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.41■□□□□ 0.86
NEK3P51956 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.41■□□□□ 0.86
NEK3P51956 AL020996.1-203ENST00000536896 2307 ntBASIC20.41■□□□□ 0.86
NEK3P51956 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK3P51956 PRORSD1P-201ENST00000295112 541 ntBASIC20.4■□□□□ 0.86
NEK3P51956 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.4■□□□□ 0.86
NEK3P51956 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NEK3P51956 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.4■□□□□ 0.86
NEK3P51956 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NEK3P51956 UNC93B4-201ENST00000505679 747 ntBASIC20.4■□□□□ 0.86
NEK3P51956 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.4■□□□□ 0.86
NEK3P51956 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.4■□□□□ 0.86
NEK3P51956 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.4■□□□□ 0.86
NEK3P51956 AC087289.5-201ENST00000586076 3175 ntBASIC20.4■□□□□ 0.86
NEK3P51956 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NEK3P51956 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK3P51956 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
NEK3P51956 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.39■□□□□ 0.86
NEK3P51956 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
NEK3P51956 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEK3P51956 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.39■□□□□ 0.86
NEK3P51956 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NEK3P51956 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEK3P51956 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
NEK3P51956 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK3P51956 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms