Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.08■■□□□ 1.12
CPT1AP50416 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
CPT1AP50416 AC007225.1-201ENST00000566331 1836 ntBASIC22.08■■□□□ 1.12
CPT1AP50416 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CPT1AP50416 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
CPT1AP50416 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CPT1AP50416 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPT1AP50416 MESTP1-201ENST00000404287 994 ntBASIC22.07■■□□□ 1.12
CPT1AP50416 KRT18P57-201ENST00000443599 1254 ntBASIC22.07■■□□□ 1.12
CPT1AP50416 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.07■■□□□ 1.12
CPT1AP50416 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.07■■□□□ 1.12
CPT1AP50416 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.07■■□□□ 1.12
CPT1AP50416 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.07■■□□□ 1.12
CPT1AP50416 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CPT1AP50416 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPT1AP50416 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPT1AP50416 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CPT1AP50416 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.07■■□□□ 1.12
CPT1AP50416 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.07■■□□□ 1.12
CPT1AP50416 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPT1AP50416 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.06■■□□□ 1.12
CPT1AP50416 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPT1AP50416 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.06■■□□□ 1.12
CPT1AP50416 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CPT1AP50416 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.06■■□□□ 1.12
CPT1AP50416 B3GAT3P1-201ENST00000471720 806 ntBASIC22.06■■□□□ 1.12
CPT1AP50416 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.06■■□□□ 1.12
CPT1AP50416 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.06■■□□□ 1.12
CPT1AP50416 C2orf69P3-201ENST00000565542 1120 ntBASIC22.06■■□□□ 1.12
CPT1AP50416 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.06■■□□□ 1.12
CPT1AP50416 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.06■■□□□ 1.12
CPT1AP50416 AP005242.2-201ENST00000580065 1175 ntBASIC22.06■■□□□ 1.12
CPT1AP50416 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.06■■□□□ 1.12
CPT1AP50416 AC131212.4-201ENST00000623606 975 ntBASIC22.06■■□□□ 1.12
CPT1AP50416 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.06■■□□□ 1.12
CPT1AP50416 AC092720.2-201ENST00000602388 1665 ntBASIC22.06■■□□□ 1.12
CPT1AP50416 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPT1AP50416 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CPT1AP50416 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.06■■□□□ 1.12
CPT1AP50416 AC079834.2-201ENST00000609776 1949 ntBASIC22.06■■□□□ 1.12
CPT1AP50416 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPT1AP50416 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CPT1AP50416 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.05■■□□□ 1.12
CPT1AP50416 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.05■■□□□ 1.12
CPT1AP50416 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.05■■□□□ 1.12
CPT1AP50416 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CPT1AP50416 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.05■■□□□ 1.12
CPT1AP50416 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CPT1AP50416 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPT1AP50416 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.04■■□□□ 1.12
CPT1AP50416 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
CPT1AP50416 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CPT1AP50416 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 AC004980.1-204ENST00000429707 299 ntBASIC22.04■■□□□ 1.12
CPT1AP50416 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPT1AP50416 AC073508.3-201ENST00000619697 1419 ntBASIC22.04■■□□□ 1.12
CPT1AP50416 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.04■■□□□ 1.12
CPT1AP50416 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPT1AP50416 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPT1AP50416 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPT1AP50416 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.03■■□□□ 1.12
CPT1AP50416 PHGDH-210ENST00000641115 1638 ntBASIC22.03■■□□□ 1.12
CPT1AP50416 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPT1AP50416 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPT1AP50416 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CPT1AP50416 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.03■■□□□ 1.12
CPT1AP50416 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CPT1AP50416 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.03■■□□□ 1.12
CPT1AP50416 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CPT1AP50416 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.03■■□□□ 1.12
CPT1AP50416 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.03■■□□□ 1.12
CPT1AP50416 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CPT1AP50416 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.03■■□□□ 1.12
CPT1AP50416 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPT1AP50416 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.03■■□□□ 1.12
CPT1AP50416 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.03■■□□□ 1.12
CPT1AP50416 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.03■■□□□ 1.12
CPT1AP50416 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.02■■□□□ 1.12
CPT1AP50416 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.02■■□□□ 1.12
CPT1AP50416 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPT1AP50416 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CPT1AP50416 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.02■■□□□ 1.12
CPT1AP50416 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPT1AP50416 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms