Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDC34P49427 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC34P49427 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC34P49427 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 AC233992.3-201ENST00000607491 485 ntBASIC15.65■□□□□ 0.1
CDC34P49427 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC34P49427 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC34P49427 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDC34P49427 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDC34P49427 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC34P49427 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC34P49427 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC34P49427 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDC34P49427 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC34P49427 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC34P49427 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC34P49427 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.64■□□□□ 0.09
CDC34P49427 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.64■□□□□ 0.09
CDC34P49427 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.64■□□□□ 0.09
CDC34P49427 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC34P49427 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC34P49427 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDC34P49427 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.64■□□□□ 0.09
CDC34P49427 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDC34P49427 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
CDC34P49427 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.64■□□□□ 0.09
CDC34P49427 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 AC005082.1-201ENST00000413042 2259 ntBASIC15.64■□□□□ 0.09
CDC34P49427 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDC34P49427 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CDC34P49427 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC34P49427 AL032819.2-201ENST00000624543 2162 ntBASIC15.63■□□□□ 0.09
CDC34P49427 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC34P49427 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC34P49427 KRT16P2-201ENST00000414673 1423 ntBASIC15.63■□□□□ 0.09
CDC34P49427 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC34P49427 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC34P49427 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC34P49427 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDC34P49427 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDC34P49427 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC34P49427 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.63■□□□□ 0.09
CDC34P49427 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC34P49427 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDC34P49427 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.63■□□□□ 0.09
CDC34P49427 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 AL138781.2-201ENST00000617896 1843 ntBASIC15.63■□□□□ 0.09
CDC34P49427 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDC34P49427 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDC34P49427 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDC34P49427 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC34P49427 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC34P49427 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC34P49427 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC34P49427 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC34P49427 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC34P49427 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC34P49427 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC34P49427 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms