Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.12■□□□□ 0.81
GRIA1P42261 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
GRIA1P42261 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 AC023632.3-201ENST00000521633 145 ntBASIC20.11■□□□□ 0.81
GRIA1P42261 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.11■□□□□ 0.81
GRIA1P42261 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.11■□□□□ 0.81
GRIA1P42261 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.11■□□□□ 0.81
GRIA1P42261 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.11■□□□□ 0.81
GRIA1P42261 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
GRIA1P42261 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.11■□□□□ 0.81
GRIA1P42261 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GRIA1P42261 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.11■□□□□ 0.81
GRIA1P42261 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.1■□□□□ 0.81
GRIA1P42261 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 HLA-G-202ENST00000376815 851 ntBASIC20.1■□□□□ 0.81
GRIA1P42261 HLA-G-203ENST00000376818 1127 ntBASIC20.1■□□□□ 0.81
GRIA1P42261 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.1■□□□□ 0.81
GRIA1P42261 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.1■□□□□ 0.81
GRIA1P42261 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.1■□□□□ 0.81
GRIA1P42261 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.1■□□□□ 0.81
GRIA1P42261 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GRIA1P42261 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
GRIA1P42261 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GRIA1P42261 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
GRIA1P42261 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GRIA1P42261 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GRIA1P42261 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
GRIA1P42261 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GRIA1P42261 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.09■□□□□ 0.81
GRIA1P42261 AC083906.2-201ENST00000511578 360 ntBASIC20.09■□□□□ 0.81
GRIA1P42261 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.09■□□□□ 0.81
GRIA1P42261 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.09■□□□□ 0.81
GRIA1P42261 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GRIA1P42261 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GRIA1P42261 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.09■□□□□ 0.81
GRIA1P42261 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GRIA1P42261 RNF165-205ENST00000588679 2904 ntBASIC20.09■□□□□ 0.81
GRIA1P42261 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
GRIA1P42261 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
GRIA1P42261 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRIA1P42261 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRIA1P42261 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.08■□□□□ 0.81
GRIA1P42261 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRIA1P42261 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRIA1P42261 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.08■□□□□ 0.81
GRIA1P42261 MIPEPP3-201ENST00000412105 444 ntBASIC20.08■□□□□ 0.81
GRIA1P42261 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.08■□□□□ 0.81
GRIA1P42261 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.08■□□□□ 0.8
GRIA1P42261 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GRIA1P42261 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
GRIA1P42261 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRIA1P42261 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRIA1P42261 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRIA1P42261 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
GRIA1P42261 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.07■□□□□ 0.8
GRIA1P42261 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.07■□□□□ 0.8
GRIA1P42261 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 PHGDH-210ENST00000641115 1638 ntBASIC20.07■□□□□ 0.8
GRIA1P42261 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GRIA1P42261 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.07■□□□□ 0.8
GRIA1P42261 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.07■□□□□ 0.8
GRIA1P42261 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
GRIA1P42261 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.07■□□□□ 0.8
GRIA1P42261 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIA1P42261 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
GRIA1P42261 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
GRIA1P42261 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
GRIA1P42261 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIA1P42261 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms