Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.01■□□□□ 0.79
XPAP23025 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.01■□□□□ 0.79
XPAP23025 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 AL121829.2-201ENST00000620908 328 ntBASIC20.01■□□□□ 0.79
XPAP23025 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.01■□□□□ 0.79
XPAP23025 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
XPAP23025 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20■□□□□ 0.79
XPAP23025 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20■□□□□ 0.79
XPAP23025 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 UBE2SP1-201ENST00000450587 669 ntBASIC20■□□□□ 0.79
XPAP23025 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20■□□□□ 0.79
XPAP23025 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20■□□□□ 0.79
XPAP23025 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20■□□□□ 0.79
XPAP23025 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
XPAP23025 PNN-205ENST00000556530 601 ntTSL 2 BASIC20■□□□□ 0.79
XPAP23025 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
XPAP23025 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
XPAP23025 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20■□□□□ 0.79
XPAP23025 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
XPAP23025 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
XPAP23025 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20■□□□□ 0.79
XPAP23025 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
XPAP23025 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.99■□□□□ 0.79
XPAP23025 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.99■□□□□ 0.79
XPAP23025 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.99■□□□□ 0.79
XPAP23025 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
XPAP23025 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.99■□□□□ 0.79
XPAP23025 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 KRASP1-201ENST00000407852 552 ntBASIC19.99■□□□□ 0.79
XPAP23025 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.99■□□□□ 0.79
XPAP23025 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
XPAP23025 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.99■□□□□ 0.79
XPAP23025 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.99■□□□□ 0.79
XPAP23025 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
XPAP23025 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.99■□□□□ 0.79
XPAP23025 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.99■□□□□ 0.79
XPAP23025 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.99■□□□□ 0.79
XPAP23025 AC066615.1-201ENST00000640911 628 ntBASIC19.99■□□□□ 0.79
XPAP23025 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
XPAP23025 AC073314.1-201ENST00000568729 2216 ntBASIC19.99■□□□□ 0.79
XPAP23025 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.99■□□□□ 0.79
XPAP23025 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XPAP23025 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
XPAP23025 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
XPAP23025 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
XPAP23025 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.98■□□□□ 0.79
XPAP23025 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.98■□□□□ 0.79
XPAP23025 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
XPAP23025 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.98■□□□□ 0.79
XPAP23025 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.98■□□□□ 0.79
XPAP23025 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.98■□□□□ 0.79
XPAP23025 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.98■□□□□ 0.79
XPAP23025 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.98■□□□□ 0.79
XPAP23025 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms