Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
UBCP0CG48 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 KRT8P17-201ENST00000453110 1448 ntBASIC17.38■□□□□ 0.37
UBCP0CG48 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBCP0CG48 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.38■□□□□ 0.37
UBCP0CG48 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBCP0CG48 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.37■□□□□ 0.37
UBCP0CG48 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.37■□□□□ 0.37
UBCP0CG48 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.37■□□□□ 0.37
UBCP0CG48 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
UBCP0CG48 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.37■□□□□ 0.37
UBCP0CG48 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.37■□□□□ 0.37
UBCP0CG48 AL031963.3-201ENST00000606441 850 ntBASIC17.37■□□□□ 0.37
UBCP0CG48 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBCP0CG48 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.37■□□□□ 0.37
UBCP0CG48 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.37■□□□□ 0.37
UBCP0CG48 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 AC098818.2-201ENST00000564925 2320 ntBASIC17.37■□□□□ 0.37
UBCP0CG48 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
UBCP0CG48 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBCP0CG48 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
UBCP0CG48 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
UBCP0CG48 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.36■□□□□ 0.37
UBCP0CG48 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.36■□□□□ 0.37
UBCP0CG48 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
UBCP0CG48 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.36■□□□□ 0.37
UBCP0CG48 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
UBCP0CG48 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.36■□□□□ 0.37
UBCP0CG48 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBCP0CG48 KRT8P20-201ENST00000423953 1409 ntBASIC17.36■□□□□ 0.37
UBCP0CG48 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
UBCP0CG48 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBCP0CG48 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.36■□□□□ 0.37
UBCP0CG48 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.35■□□□□ 0.37
UBCP0CG48 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.35■□□□□ 0.37
UBCP0CG48 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
UBCP0CG48 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
UBCP0CG48 RARRES2P4-201ENST00000514074 484 ntBASIC17.35■□□□□ 0.37
UBCP0CG48 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.35■□□□□ 0.37
UBCP0CG48 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 AC005332.7-201ENST00000614046 2005 ntBASIC17.35■□□□□ 0.37
UBCP0CG48 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
UBCP0CG48 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.35■□□□□ 0.37
UBCP0CG48 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBCP0CG48 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBCP0CG48 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBCP0CG48 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.34■□□□□ 0.37
UBCP0CG48 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBCP0CG48 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms