Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL4A2P08572 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.15■□□□□ 0.82
COL4A2P08572 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.15■□□□□ 0.82
COL4A2P08572 FEM1AP4-201ENST00000443167 1987 ntBASIC20.15■□□□□ 0.82
COL4A2P08572 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COL4A2P08572 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A2P08572 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
COL4A2P08572 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL4A2P08572 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A2P08572 DPP3P2-201ENST00000416030 1696 ntBASIC20.14■□□□□ 0.81
COL4A2P08572 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A2P08572 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A2P08572 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.14■□□□□ 0.81
COL4A2P08572 AK4P3-201ENST00000418260 669 ntBASIC20.14■□□□□ 0.81
COL4A2P08572 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.14■□□□□ 0.81
COL4A2P08572 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.14■□□□□ 0.81
COL4A2P08572 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A2P08572 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
COL4A2P08572 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A2P08572 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.14■□□□□ 0.81
COL4A2P08572 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.14■□□□□ 0.81
COL4A2P08572 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A2P08572 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.14■□□□□ 0.81
COL4A2P08572 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COL4A2P08572 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.14■□□□□ 0.81
COL4A2P08572 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A2P08572 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
COL4A2P08572 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.13■□□□□ 0.81
COL4A2P08572 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.13■□□□□ 0.81
COL4A2P08572 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.13■□□□□ 0.81
COL4A2P08572 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.13■□□□□ 0.81
COL4A2P08572 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.13■□□□□ 0.81
COL4A2P08572 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.13■□□□□ 0.81
COL4A2P08572 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.13■□□□□ 0.81
COL4A2P08572 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.13■□□□□ 0.81
COL4A2P08572 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A2P08572 LIN28AP1-201ENST00000429574 405 ntBASIC20.13■□□□□ 0.81
COL4A2P08572 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.13■□□□□ 0.81
COL4A2P08572 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
COL4A2P08572 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A2P08572 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A2P08572 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.12■□□□□ 0.81
COL4A2P08572 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL4A2P08572 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.12■□□□□ 0.81
COL4A2P08572 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A2P08572 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.12■□□□□ 0.81
COL4A2P08572 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A2P08572 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL4A2P08572 HMGA1P5-201ENST00000412453 271 ntBASIC20.12■□□□□ 0.81
COL4A2P08572 CRYGFP-201ENST00000418459 633 ntBASIC20.12■□□□□ 0.81
COL4A2P08572 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL4A2P08572 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.12■□□□□ 0.81
COL4A2P08572 AC087388.1-201ENST00000571370 1112 ntBASIC20.12■□□□□ 0.81
COL4A2P08572 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.12■□□□□ 0.81
COL4A2P08572 PHGDH-210ENST00000641115 1638 ntBASIC20.12■□□□□ 0.81
COL4A2P08572 PLK5-205ENST00000642079 1969 ntBASIC20.12■□□□□ 0.81
COL4A2P08572 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.11■□□□□ 0.81
COL4A2P08572 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL4A2P08572 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL4A2P08572 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
COL4A2P08572 FAM8A6P-201ENST00000407496 1135 ntBASIC20.11■□□□□ 0.81
COL4A2P08572 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A2P08572 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL4A2P08572 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A2P08572 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A2P08572 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.11■□□□□ 0.81
COL4A2P08572 HLA-A-209ENST00000638375 975 ntBASIC20.11■□□□□ 0.81
COL4A2P08572 FBXW4P1-201ENST00000426721 2239 ntBASIC20.11■□□□□ 0.81
COL4A2P08572 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.11■□□□□ 0.81
COL4A2P08572 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL4A2P08572 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A2P08572 TUBB8P6-201ENST00000436895 1288 ntBASIC20.1■□□□□ 0.81
COL4A2P08572 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
COL4A2P08572 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
COL4A2P08572 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
COL4A2P08572 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
COL4A2P08572 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL4A2P08572 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A2P08572 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A2P08572 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
COL4A2P08572 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A2P08572 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms