Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RHOP08100 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.63■□□□□ 0.89
RHOP08100 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHOP08100 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHOP08100 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHOP08100 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.63■□□□□ 0.89
RHOP08100 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.63■□□□□ 0.89
RHOP08100 FSCN1P1-201ENST00000568912 1481 ntBASIC20.63■□□□□ 0.89
RHOP08100 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHOP08100 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RHOP08100 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHOP08100 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHOP08100 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.63■□□□□ 0.89
RHOP08100 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.63■□□□□ 0.89
RHOP08100 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.63■□□□□ 0.89
RHOP08100 MESTP1-201ENST00000404287 994 ntBASIC20.63■□□□□ 0.89
RHOP08100 YBX1P10-201ENST00000444752 975 ntBASIC20.63■□□□□ 0.89
RHOP08100 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.63■□□□□ 0.89
RHOP08100 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.63■□□□□ 0.89
RHOP08100 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.63■□□□□ 0.89
RHOP08100 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.63■□□□□ 0.89
RHOP08100 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.63■□□□□ 0.89
RHOP08100 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.63■□□□□ 0.89
RHOP08100 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
RHOP08100 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RHOP08100 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RHOP08100 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RHOP08100 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHOP08100 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.62■□□□□ 0.89
RHOP08100 AC092720.2-201ENST00000602388 1665 ntBASIC20.62■□□□□ 0.89
RHOP08100 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RHOP08100 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
RHOP08100 KRT18P57-201ENST00000443599 1254 ntBASIC20.62■□□□□ 0.89
RHOP08100 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.62■□□□□ 0.89
RHOP08100 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.62■□□□□ 0.89
RHOP08100 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
RHOP08100 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHOP08100 KRT18P16-201ENST00000510337 1294 ntBASIC20.62■□□□□ 0.89
RHOP08100 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RHOP08100 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.62■□□□□ 0.89
RHOP08100 AC026271.3-201ENST00000571884 352 ntBASIC20.62■□□□□ 0.89
RHOP08100 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHOP08100 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.62■□□□□ 0.89
RHOP08100 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RHOP08100 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RHOP08100 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.62■□□□□ 0.89
RHOP08100 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
RHOP08100 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RHOP08100 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.61■□□□□ 0.89
RHOP08100 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.61■□□□□ 0.89
RHOP08100 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RHOP08100 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOP08100 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOP08100 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.61■□□□□ 0.89
RHOP08100 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.61■□□□□ 0.89
RHOP08100 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.61■□□□□ 0.89
RHOP08100 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
RHOP08100 AL590326.2-201ENST00000625139 305 ntBASIC20.61■□□□□ 0.89
RHOP08100 AC026310.3-201ENST00000625186 2373 ntBASIC20.61■□□□□ 0.89
RHOP08100 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RHOP08100 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOP08100 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RHOP08100 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOP08100 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RHOP08100 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOP08100 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOP08100 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.6■□□□□ 0.89
RHOP08100 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RHOP08100 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOP08100 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
RHOP08100 TERF1P1-201ENST00000311003 1181 ntBASIC20.6■□□□□ 0.89
RHOP08100 ARMC10P1-201ENST00000313754 855 ntBASIC20.6■□□□□ 0.89
RHOP08100 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.6■□□□□ 0.89
RHOP08100 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.6■□□□□ 0.89
RHOP08100 TUBB8P6-201ENST00000436895 1288 ntBASIC20.6■□□□□ 0.89
RHOP08100 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.6■□□□□ 0.89
RHOP08100 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.6■□□□□ 0.89
RHOP08100 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.6■□□□□ 0.89
RHOP08100 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOP08100 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RHOP08100 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOP08100 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.6■□□□□ 0.89
RHOP08100 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RHOP08100 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.6■□□□□ 0.89
RHOP08100 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.6■□□□□ 0.89
RHOP08100 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOP08100 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOP08100 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOP08100 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOP08100 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RHOP08100 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.59■□□□□ 0.89
RHOP08100 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RHOP08100 AL137013.1-201ENST00000432946 1228 ntBASIC20.59■□□□□ 0.89
RHOP08100 SLC25A3P1-201ENST00000443844 931 ntBASIC20.59■□□□□ 0.89
RHOP08100 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.59■□□□□ 0.89
RHOP08100 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.59■□□□□ 0.89
RHOP08100 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.59■□□□□ 0.89
RHOP08100 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.59■□□□□ 0.89
RHOP08100 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.59■□□□□ 0.89
RHOP08100 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms