Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT6BP04259 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6BP04259 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6BP04259 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6BP04259 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6BP04259 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6BP04259 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6BP04259 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6BP04259 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT6BP04259 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRT6BP04259 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT6BP04259 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KRT6BP04259 AL158211.5-201ENST00000623583 2518 ntBASIC19.2■□□□□ 0.66
KRT6BP04259 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
KRT6BP04259 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6BP04259 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT6BP04259 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
KRT6BP04259 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6BP04259 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6BP04259 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6BP04259 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT6BP04259 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
KRT6BP04259 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KRT6BP04259 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT6BP04259 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6BP04259 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT6BP04259 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6BP04259 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT6BP04259 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6BP04259 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6BP04259 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6BP04259 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KRT6BP04259 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KRT6BP04259 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
KRT6BP04259 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6BP04259 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6BP04259 AC004911.1-201ENST00000416316 871 ntBASIC19.18■□□□□ 0.66
KRT6BP04259 AC093787.1-201ENST00000450396 207 ntBASIC19.18■□□□□ 0.66
KRT6BP04259 AC023632.3-201ENST00000521633 145 ntBASIC19.18■□□□□ 0.66
KRT6BP04259 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6BP04259 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT6BP04259 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6BP04259 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KRT6BP04259 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6BP04259 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT6BP04259 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6BP04259 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT6BP04259 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
KRT6BP04259 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.17■□□□□ 0.66
KRT6BP04259 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6BP04259 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT6BP04259 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
KRT6BP04259 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6BP04259 AC133552.2-202ENST00000575694 574 ntBASIC19.17■□□□□ 0.66
KRT6BP04259 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KRT6BP04259 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT6BP04259 AC080038.1-201ENST00000611274 1154 ntBASIC19.17■□□□□ 0.66
KRT6BP04259 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6BP04259 AP001271.2-201ENST00000624018 1556 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms