Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBP04114 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBP04114 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBP04114 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBP04114 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBP04114 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBP04114 AL691432.3-201ENST00000621860 400 ntBASIC12.48□□□□□ -0.41
APOBP04114 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBP04114 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBP04114 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBP04114 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
APOBP04114 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC12.47□□□□□ -0.41
APOBP04114 Z85996.1-201ENST00000494644 937 ntBASIC12.47□□□□□ -0.41
APOBP04114 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
APOBP04114 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOBP04114 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 GOLGA2P6-201ENST00000340929 2049 ntBASIC12.47□□□□□ -0.41
APOBP04114 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBP04114 VENTXP5-201ENST00000523979 775 ntBASIC12.47□□□□□ -0.41
APOBP04114 AL441883.1-201ENST00000566170 1045 ntBASIC12.47□□□□□ -0.41
APOBP04114 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.47□□□□□ -0.41
APOBP04114 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC12.47□□□□□ -0.41
APOBP04114 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOBP04114 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBP04114 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBP04114 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBP04114 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBP04114 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBP04114 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBP04114 AC010653.2-201ENST00000623505 997 ntBASIC12.47□□□□□ -0.41
APOBP04114 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
APOBP04114 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBP04114 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.46□□□□□ -0.41
APOBP04114 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
APOBP04114 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
APOBP04114 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBP04114 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.46□□□□□ -0.41
APOBP04114 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 HLA-A-209ENST00000638375 975 ntBASIC12.46□□□□□ -0.41
APOBP04114 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 AL121603.2-201ENST00000557373 2117 ntBASIC12.46□□□□□ -0.41
APOBP04114 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBP04114 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.46□□□□□ -0.42
APOBP04114 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOBP04114 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
APOBP04114 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.46□□□□□ -0.42
APOBP04114 STK25-204ENST00000405585 1643 ntTSL 2 BASIC12.46□□□□□ -0.42
APOBP04114 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
APOBP04114 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOBP04114 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBP04114 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBP04114 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.45□□□□□ -0.42
APOBP04114 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBP04114 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBP04114 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOBP04114 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOBP04114 AC012313.10-201ENST00000623509 926 ntBASIC12.45□□□□□ -0.42
APOBP04114 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBP04114 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBP04114 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBP04114 SPDYE13P-201ENST00000445314 798 ntBASIC12.45□□□□□ -0.42
APOBP04114 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.45□□□□□ -0.42
APOBP04114 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
APOBP04114 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOBP04114 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOBP04114 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBP04114 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
APOBP04114 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBP04114 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOBP04114 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBP04114 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
APOBP04114 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBP04114 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC12.44□□□□□ -0.42
APOBP04114 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBP04114 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBP04114 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOBP04114 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms