Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MT-ND3P03897 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 AC005332.7-201ENST00000614046 2005 ntBASIC20.15■□□□□ 0.82
MT-ND3P03897 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 AC138932.1-201ENST00000534164 6830 ntBASIC20.15■□□□□ 0.82
MT-ND3P03897 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 SLC29A4P1-201ENST00000398760 971 ntBASIC20.15■□□□□ 0.82
MT-ND3P03897 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.15■□□□□ 0.82
MT-ND3P03897 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 AC010536.3-201ENST00000620306 533 ntBASIC20.15■□□□□ 0.82
MT-ND3P03897 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MT-ND3P03897 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MT-ND3P03897 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MT-ND3P03897 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MT-ND3P03897 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
MT-ND3P03897 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MT-ND3P03897 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MT-ND3P03897 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.14■□□□□ 0.81
MT-ND3P03897 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.14■□□□□ 0.81
MT-ND3P03897 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MT-ND3P03897 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-ND3P03897 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.14■□□□□ 0.81
MT-ND3P03897 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-ND3P03897 AC007322.3-201ENST00000426526 701 ntBASIC20.14■□□□□ 0.81
MT-ND3P03897 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-ND3P03897 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-ND3P03897 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.14■□□□□ 0.81
MT-ND3P03897 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MT-ND3P03897 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
MT-ND3P03897 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MT-ND3P03897 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.13■□□□□ 0.81
MT-ND3P03897 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.13■□□□□ 0.81
MT-ND3P03897 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.13■□□□□ 0.81
MT-ND3P03897 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.13■□□□□ 0.81
MT-ND3P03897 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MT-ND3P03897 AC091799.1-201ENST00000422823 811 ntBASIC20.13■□□□□ 0.81
MT-ND3P03897 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.13■□□□□ 0.81
MT-ND3P03897 FAM21FP-204ENST00000608637 956 ntBASIC20.13■□□□□ 0.81
MT-ND3P03897 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MT-ND3P03897 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.13■□□□□ 0.81
MT-ND3P03897 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.13■□□□□ 0.81
MT-ND3P03897 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.13■□□□□ 0.81
MT-ND3P03897 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MT-ND3P03897 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.13■□□□□ 0.81
MT-ND3P03897 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MT-ND3P03897 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.12■□□□□ 0.81
MT-ND3P03897 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MT-ND3P03897 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.12■□□□□ 0.81
MT-ND3P03897 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 TSPY6P-201ENST00000448518 926 ntBASIC20.12■□□□□ 0.81
MT-ND3P03897 AC142086.2-201ENST00000569753 217 ntBASIC20.12■□□□□ 0.81
MT-ND3P03897 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 AL050303.2-201ENST00000619798 666 ntBASIC20.12■□□□□ 0.81
MT-ND3P03897 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
MT-ND3P03897 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.12■□□□□ 0.81
MT-ND3P03897 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MT-ND3P03897 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
MT-ND3P03897 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms