Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.04■■□□□ 1.28
CTDNEP1O95476 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTDNEP1O95476 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CTDNEP1O95476 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.04■■□□□ 1.28
CTDNEP1O95476 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.04■■□□□ 1.28
CTDNEP1O95476 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.04■■□□□ 1.28
CTDNEP1O95476 AC006557.6-201ENST00000623071 864 ntBASIC23.04■■□□□ 1.28
CTDNEP1O95476 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.04■■□□□ 1.28
CTDNEP1O95476 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CTDNEP1O95476 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.04■■□□□ 1.28
CTDNEP1O95476 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTDNEP1O95476 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.04■■□□□ 1.28
CTDNEP1O95476 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTDNEP1O95476 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CTDNEP1O95476 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 AC124283.5-201ENST00000624661 1809 ntBASIC23.03■■□□□ 1.28
CTDNEP1O95476 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.03■■□□□ 1.28
CTDNEP1O95476 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 AC018553.1-201ENST00000616682 1458 ntBASIC23.03■■□□□ 1.28
CTDNEP1O95476 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CTDNEP1O95476 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CTDNEP1O95476 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 AC097658.1-201ENST00000475555 843 ntBASIC23.02■■□□□ 1.28
CTDNEP1O95476 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CTDNEP1O95476 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.02■■□□□ 1.28
CTDNEP1O95476 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.01■■□□□ 1.27
CTDNEP1O95476 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.01■■□□□ 1.27
CTDNEP1O95476 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.01■■□□□ 1.27
CTDNEP1O95476 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CTDNEP1O95476 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CTDNEP1O95476 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.01■■□□□ 1.27
CTDNEP1O95476 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CTDNEP1O95476 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CTDNEP1O95476 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CTDNEP1O95476 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CTDNEP1O95476 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CTDNEP1O95476 AC116351.2-201ENST00000606540 1585 ntBASIC23.01■■□□□ 1.27
CTDNEP1O95476 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 AC093484.2-201ENST00000580996 2166 ntBASIC23■■□□□ 1.27
CTDNEP1O95476 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
CTDNEP1O95476 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23■■□□□ 1.27
CTDNEP1O95476 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23■■□□□ 1.27
CTDNEP1O95476 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CTDNEP1O95476 AC069152.1-201ENST00000438030 544 ntBASIC23■■□□□ 1.27
CTDNEP1O95476 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CTDNEP1O95476 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23■■□□□ 1.27
CTDNEP1O95476 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
CTDNEP1O95476 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23■■□□□ 1.27
CTDNEP1O95476 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CTDNEP1O95476 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CTDNEP1O95476 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CTDNEP1O95476 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 HLA-B-256ENST00000639848 1089 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms