Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.93■□□□□ 0.78
VAPBO95292 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.93■□□□□ 0.78
VAPBO95292 AC006970.2-201ENST00000450065 779 ntBASIC19.93■□□□□ 0.78
VAPBO95292 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.93■□□□□ 0.78
VAPBO95292 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 AC083906.2-201ENST00000511578 360 ntBASIC19.93■□□□□ 0.78
VAPBO95292 AC023632.3-201ENST00000521633 145 ntBASIC19.93■□□□□ 0.78
VAPBO95292 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.93■□□□□ 0.78
VAPBO95292 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
VAPBO95292 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.93■□□□□ 0.78
VAPBO95292 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VAPBO95292 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VAPBO95292 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VAPBO95292 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
VAPBO95292 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.92■□□□□ 0.78
VAPBO95292 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.92■□□□□ 0.78
VAPBO95292 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.92■□□□□ 0.78
VAPBO95292 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.92■□□□□ 0.78
VAPBO95292 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VAPBO95292 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
VAPBO95292 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.92■□□□□ 0.78
VAPBO95292 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.92■□□□□ 0.78
VAPBO95292 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.92■□□□□ 0.78
VAPBO95292 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VAPBO95292 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VAPBO95292 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VAPBO95292 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.92■□□□□ 0.78
VAPBO95292 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPBO95292 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPBO95292 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPBO95292 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VAPBO95292 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VAPBO95292 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPBO95292 GPX1P1-201ENST00000388829 606 ntBASIC19.91■□□□□ 0.78
VAPBO95292 AL121832.2-201ENST00000610979 668 ntBASIC19.91■□□□□ 0.78
VAPBO95292 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VAPBO95292 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VAPBO95292 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPBO95292 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPBO95292 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPBO95292 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPBO95292 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
VAPBO95292 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.91■□□□□ 0.78
VAPBO95292 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VAPBO95292 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VAPBO95292 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VAPBO95292 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 MIPEPP3-201ENST00000412105 444 ntBASIC19.9■□□□□ 0.78
VAPBO95292 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.9■□□□□ 0.78
VAPBO95292 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.9■□□□□ 0.78
VAPBO95292 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPBO95292 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
VAPBO95292 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
VAPBO95292 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VAPBO95292 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VAPBO95292 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.89■□□□□ 0.77
VAPBO95292 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.89■□□□□ 0.77
VAPBO95292 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.89■□□□□ 0.77
VAPBO95292 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.89■□□□□ 0.77
VAPBO95292 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.89■□□□□ 0.77
VAPBO95292 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
VAPBO95292 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.89■□□□□ 0.77
VAPBO95292 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPBO95292 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.88■□□□□ 0.77
VAPBO95292 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms