Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 AL355472.2-201ENST00000422958 438 ntBASIC17.78■□□□□ 0.44
UBL3O95164 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.78■□□□□ 0.44
UBL3O95164 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.78■□□□□ 0.44
UBL3O95164 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.78■□□□□ 0.44
UBL3O95164 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL3O95164 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL3O95164 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.78■□□□□ 0.44
UBL3O95164 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBL3O95164 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL3O95164 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
UBL3O95164 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBL3O95164 TNXA-203ENST00000507684 2038 ntBASIC17.77■□□□□ 0.44
UBL3O95164 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL3O95164 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL3O95164 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBL3O95164 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UBL3O95164 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBL3O95164 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL3O95164 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.77■□□□□ 0.44
UBL3O95164 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL3O95164 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UBL3O95164 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL3O95164 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.77■□□□□ 0.44
UBL3O95164 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
UBL3O95164 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.77■□□□□ 0.44
UBL3O95164 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UBL3O95164 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.77■□□□□ 0.44
UBL3O95164 AP000974.1-201ENST00000623909 2387 ntBASIC17.77■□□□□ 0.44
UBL3O95164 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL3O95164 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.77■□□□□ 0.43
UBL3O95164 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.77■□□□□ 0.43
UBL3O95164 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
UBL3O95164 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBL3O95164 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBL3O95164 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBL3O95164 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.77■□□□□ 0.43
UBL3O95164 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
UBL3O95164 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.77■□□□□ 0.43
UBL3O95164 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
UBL3O95164 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UBL3O95164 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
UBL3O95164 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
UBL3O95164 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBL3O95164 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
UBL3O95164 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
UBL3O95164 MIPEPP3-201ENST00000412105 444 ntBASIC17.76■□□□□ 0.43
UBL3O95164 GUSBP6-202ENST00000438529 1198 ntBASIC17.76■□□□□ 0.43
UBL3O95164 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.76■□□□□ 0.43
UBL3O95164 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.76■□□□□ 0.43
UBL3O95164 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.76■□□□□ 0.43
UBL3O95164 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.76■□□□□ 0.43
UBL3O95164 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL3O95164 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBL3O95164 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.75■□□□□ 0.43
UBL3O95164 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.75■□□□□ 0.43
UBL3O95164 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBL3O95164 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBL3O95164 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.75■□□□□ 0.43
UBL3O95164 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBL3O95164 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 ID1-201ENST00000376105 1233 ntBASIC17.75■□□□□ 0.43
UBL3O95164 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
UBL3O95164 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
UBL3O95164 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.75■□□□□ 0.43
UBL3O95164 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.75■□□□□ 0.43
UBL3O95164 MIR4758-201ENST00000577688 71 ntBASIC17.75■□□□□ 0.43
UBL3O95164 AC104771.1-201ENST00000603335 964 ntBASIC17.75■□□□□ 0.43
UBL3O95164 KRT17P1-201ENST00000399211 1546 ntBASIC17.75■□□□□ 0.43
UBL3O95164 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
UBL3O95164 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
UBL3O95164 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.75■□□□□ 0.43
UBL3O95164 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.75■□□□□ 0.43
UBL3O95164 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL3O95164 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
UBL3O95164 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms