Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
LTN1O94822 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LTN1O94822 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LTN1O94822 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
LTN1O94822 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
LTN1O94822 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
LTN1O94822 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 FDX2-206ENST00000492239 773 ntTSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
LTN1O94822 AC022616.7-201ENST00000525383 220 ntBASIC26.48■■□□□ 1.83
LTN1O94822 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
LTN1O94822 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
LTN1O94822 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LTN1O94822 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
LTN1O94822 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC26.47■■□□□ 1.83
LTN1O94822 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC26.47■■□□□ 1.83
LTN1O94822 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC26.47■■□□□ 1.83
LTN1O94822 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
LTN1O94822 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LTN1O94822 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.46■■□□□ 1.83
LTN1O94822 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.46■■□□□ 1.83
LTN1O94822 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
LTN1O94822 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.46■■□□□ 1.83
LTN1O94822 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
LTN1O94822 TUBB8P6-201ENST00000436895 1288 ntBASIC26.46■■□□□ 1.83
LTN1O94822 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC26.46■■□□□ 1.83
LTN1O94822 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 WWOX-216ENST00000569818 525 ntBASIC26.46■■□□□ 1.83
LTN1O94822 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.46■■□□□ 1.83
LTN1O94822 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.46■■□□□ 1.83
LTN1O94822 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC26.46■■□□□ 1.83
LTN1O94822 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.46■■□□□ 1.83
LTN1O94822 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LTN1O94822 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
LTN1O94822 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.46■■□□□ 1.83
LTN1O94822 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
LTN1O94822 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
LTN1O94822 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC26.45■■□□□ 1.83
LTN1O94822 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC26.45■■□□□ 1.82
LTN1O94822 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
LTN1O94822 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
LTN1O94822 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC26.45■■□□□ 1.82
LTN1O94822 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LTN1O94822 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
LTN1O94822 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.44■■□□□ 1.82
LTN1O94822 AC092720.2-201ENST00000602388 1665 ntBASIC26.44■■□□□ 1.82
LTN1O94822 AC026310.3-201ENST00000625186 2373 ntBASIC26.44■■□□□ 1.82
LTN1O94822 AC097488.1-201ENST00000507834 756 ntBASIC26.44■■□□□ 1.82
LTN1O94822 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC26.44■■□□□ 1.82
LTN1O94822 NTF6B-201ENST00000591913 560 ntBASIC26.44■■□□□ 1.82
LTN1O94822 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC26.44■■□□□ 1.82
LTN1O94822 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
LTN1O94822 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LTN1O94822 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LTN1O94822 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
LTN1O94822 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
LTN1O94822 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
LTN1O94822 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
LTN1O94822 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LTN1O94822 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
LTN1O94822 CLN6-221ENST00000637494 765 ntTSL 5 BASIC26.43■■□□□ 1.82
LTN1O94822 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
LTN1O94822 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.43■■□□□ 1.82
LTN1O94822 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
LTN1O94822 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC26.43■■□□□ 1.82
LTN1O94822 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LTN1O94822 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC26.43■■□□□ 1.82
LTN1O94822 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC26.43■■□□□ 1.82
LTN1O94822 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
LTN1O94822 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC26.43■■□□□ 1.82
LTN1O94822 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.43■■□□□ 1.82
LTN1O94822 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms