Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.9■□□□□ 0.94
BEST1O76090 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
BEST1O76090 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
BEST1O76090 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BEST1O76090 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.9■□□□□ 0.94
BEST1O76090 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.9■□□□□ 0.94
BEST1O76090 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.9■□□□□ 0.94
BEST1O76090 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.9■□□□□ 0.94
BEST1O76090 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
BEST1O76090 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST1O76090 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BEST1O76090 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BEST1O76090 TFP1-202ENST00000475455 1573 ntBASIC20.89■□□□□ 0.94
BEST1O76090 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.89■□□□□ 0.94
BEST1O76090 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.89■□□□□ 0.93
BEST1O76090 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST1O76090 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.89■□□□□ 0.93
BEST1O76090 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
BEST1O76090 PRKY-204ENST00000533551 1019 ntBASIC20.89■□□□□ 0.93
BEST1O76090 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
BEST1O76090 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.89■□□□□ 0.93
BEST1O76090 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
BEST1O76090 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST1O76090 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST1O76090 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.88■□□□□ 0.93
BEST1O76090 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
BEST1O76090 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.88■□□□□ 0.93
BEST1O76090 UBE2SP1-201ENST00000450587 669 ntBASIC20.88■□□□□ 0.93
BEST1O76090 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.88■□□□□ 0.93
BEST1O76090 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.88■□□□□ 0.93
BEST1O76090 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.88■□□□□ 0.93
BEST1O76090 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.88■□□□□ 0.93
BEST1O76090 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.88■□□□□ 0.93
BEST1O76090 AC110285.5-201ENST00000611501 352 ntBASIC20.88■□□□□ 0.93
BEST1O76090 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.88■□□□□ 0.93
BEST1O76090 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.88■□□□□ 0.93
BEST1O76090 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BEST1O76090 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.88■□□□□ 0.93
BEST1O76090 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
BEST1O76090 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.87■□□□□ 0.93
BEST1O76090 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.87■□□□□ 0.93
BEST1O76090 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.87■□□□□ 0.93
BEST1O76090 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
BEST1O76090 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.87■□□□□ 0.93
BEST1O76090 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.87■□□□□ 0.93
BEST1O76090 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.87■□□□□ 0.93
BEST1O76090 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.87■□□□□ 0.93
BEST1O76090 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BEST1O76090 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.86■□□□□ 0.93
BEST1O76090 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.86■□□□□ 0.93
BEST1O76090 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BEST1O76090 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.86■□□□□ 0.93
BEST1O76090 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
BEST1O76090 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BEST1O76090 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
BEST1O76090 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.86■□□□□ 0.93
BEST1O76090 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.86■□□□□ 0.93
BEST1O76090 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.86■□□□□ 0.93
BEST1O76090 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.86■□□□□ 0.93
BEST1O76090 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.86■□□□□ 0.93
BEST1O76090 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
BEST1O76090 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 NBPF21P-201ENST00000425093 1451 ntBASIC20.86■□□□□ 0.93
BEST1O76090 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms