Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
USH2AO75445 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 LINC01311-201ENST00000565162 1445 ntBASIC8.91□□□□□ -0.98
USH2AO75445 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 MFAP1P1-201ENST00000442257 1255 ntBASIC8.91□□□□□ -0.98
USH2AO75445 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
USH2AO75445 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 PALM-207ENST00000590161 2137 ntTSL 4 BASIC8.91□□□□□ -0.98
USH2AO75445 BX119927.1-201ENST00000636596 1552 ntBASIC8.91□□□□□ -0.98
USH2AO75445 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
USH2AO75445 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
USH2AO75445 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 CCR12P-201ENST00000446203 998 ntBASIC8.91□□□□□ -0.98
USH2AO75445 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC8.91□□□□□ -0.98
USH2AO75445 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
USH2AO75445 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
USH2AO75445 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC8.9□□□□□ -0.98
USH2AO75445 AC092865.5-201ENST00000545435 363 ntBASIC8.9□□□□□ -0.98
USH2AO75445 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC8.9□□□□□ -0.98
USH2AO75445 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
USH2AO75445 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC8.9□□□□□ -0.98
USH2AO75445 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC8.9□□□□□ -0.98
USH2AO75445 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC8.9□□□□□ -0.98
USH2AO75445 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
USH2AO75445 AL023803.3-201ENST00000615559 522 ntBASIC8.9□□□□□ -0.98
USH2AO75445 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
USH2AO75445 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
USH2AO75445 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
USH2AO75445 PHB2-202ENST00000440277 996 ntTSL 5 BASIC8.9□□□□□ -0.98
USH2AO75445 AC079781.3-201ENST00000449110 356 ntBASIC8.9□□□□□ -0.98
USH2AO75445 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC8.9□□□□□ -0.98
USH2AO75445 BX640515.1-201ENST00000617215 977 ntBASIC8.9□□□□□ -0.98
USH2AO75445 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC8.9□□□□□ -0.98
USH2AO75445 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC8.9□□□□□ -0.98
USH2AO75445 PREB-202ENST00000406567 1910 ntTSL 5 BASIC8.9□□□□□ -0.98
USH2AO75445 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC8.9□□□□□ -0.98
USH2AO75445 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
USH2AO75445 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
USH2AO75445 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
USH2AO75445 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.99
USH2AO75445 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC8.9□□□□□ -0.99
USH2AO75445 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
USH2AO75445 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC8.9□□□□□ -0.99
USH2AO75445 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC8.9□□□□□ -0.99
USH2AO75445 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC8.9□□□□□ -0.99
USH2AO75445 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
USH2AO75445 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.99
USH2AO75445 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC8.9□□□□□ -0.99
USH2AO75445 STX5-203ENST00000394690 1568 ntTSL 5 BASIC8.9□□□□□ -0.99
USH2AO75445 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC8.9□□□□□ -0.99
USH2AO75445 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.99
USH2AO75445 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 KRT18P31-201ENST00000506277 1292 ntBASIC8.89□□□□□ -0.99
USH2AO75445 AP002414.4-201ENST00000589764 1148 ntBASIC8.89□□□□□ -0.99
USH2AO75445 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC8.89□□□□□ -0.99
USH2AO75445 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC8.89□□□□□ -0.99
USH2AO75445 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 EXOC3-AS1-202ENST00000623673 1663 ntBASIC8.89□□□□□ -0.99
USH2AO75445 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC8.89□□□□□ -0.99
USH2AO75445 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
USH2AO75445 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
USH2AO75445 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC8.89□□□□□ -0.99
USH2AO75445 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC8.89□□□□□ -0.99
USH2AO75445 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC8.89□□□□□ -0.99
USH2AO75445 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
USH2AO75445 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms