Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AC011484.1-201ENST00000377652 1995 ntBASIC19.19■□□□□ 0.66
CNOT3O75175 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNOT3O75175 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT3O75175 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT3O75175 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT3O75175 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CNOT3O75175 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CNOT3O75175 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 UNC93B4-201ENST00000505679 747 ntBASIC19.18■□□□□ 0.66
CNOT3O75175 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.18■□□□□ 0.66
CNOT3O75175 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT3O75175 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT3O75175 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CNOT3O75175 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CNOT3O75175 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT3O75175 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT3O75175 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT3O75175 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CNOT3O75175 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT3O75175 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT3O75175 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CNOT3O75175 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CNOT3O75175 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.17■□□□□ 0.66
CNOT3O75175 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
CNOT3O75175 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT3O75175 AL356652.1-201ENST00000615962 565 ntBASIC19.17■□□□□ 0.66
CNOT3O75175 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT3O75175 LETM1P2-201ENST00000597330 2178 ntBASIC19.17■□□□□ 0.66
CNOT3O75175 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNOT3O75175 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT3O75175 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT3O75175 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CNOT3O75175 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT3O75175 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.16■□□□□ 0.66
CNOT3O75175 SOX15-203ENST00000570788 1093 ntBASIC19.16■□□□□ 0.66
CNOT3O75175 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT3O75175 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.16■□□□□ 0.66
CNOT3O75175 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.16■□□□□ 0.66
CNOT3O75175 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT3O75175 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 AL049796.1-201ENST00000565336 1766 ntBASIC19.16■□□□□ 0.66
CNOT3O75175 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT3O75175 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.15■□□□□ 0.66
CNOT3O75175 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNOT3O75175 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNOT3O75175 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT3O75175 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNOT3O75175 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNOT3O75175 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNOT3O75175 AC093827.2-201ENST00000512654 315 ntBASIC19.15■□□□□ 0.66
CNOT3O75175 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.15■□□□□ 0.66
CNOT3O75175 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.15■□□□□ 0.66
CNOT3O75175 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT3O75175 AC233263.1-201ENST00000578059 224 ntBASIC19.15■□□□□ 0.66
CNOT3O75175 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms