Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.1■□□□□ 0.81
SMAD6O43541 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 PHGDH-210ENST00000641115 1638 ntBASIC20.1■□□□□ 0.81
SMAD6O43541 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SMAD6O43541 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMAD6O43541 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.1■□□□□ 0.81
SMAD6O43541 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.1■□□□□ 0.81
SMAD6O43541 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.1■□□□□ 0.81
SMAD6O43541 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.1■□□□□ 0.81
SMAD6O43541 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMAD6O43541 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.1■□□□□ 0.81
SMAD6O43541 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMAD6O43541 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMAD6O43541 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 TFP1-202ENST00000475455 1573 ntBASIC20.09■□□□□ 0.81
SMAD6O43541 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.09■□□□□ 0.81
SMAD6O43541 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.09■□□□□ 0.81
SMAD6O43541 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SMAD6O43541 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SMAD6O43541 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMAD6O43541 AC099778.1-201ENST00000568593 1911 ntBASIC20.09■□□□□ 0.81
SMAD6O43541 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.09■□□□□ 0.81
SMAD6O43541 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMAD6O43541 AL691432.2-201ENST00000607222 2038 ntBASIC20.09■□□□□ 0.81
SMAD6O43541 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.08■□□□□ 0.81
SMAD6O43541 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.08■□□□□ 0.81
SMAD6O43541 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.08■□□□□ 0.81
SMAD6O43541 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMAD6O43541 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SMAD6O43541 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
SMAD6O43541 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.08■□□□□ 0.8
SMAD6O43541 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMAD6O43541 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMAD6O43541 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.08■□□□□ 0.8
SMAD6O43541 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SMAD6O43541 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.07■□□□□ 0.8
SMAD6O43541 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
SMAD6O43541 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
SMAD6O43541 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.07■□□□□ 0.8
SMAD6O43541 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.07■□□□□ 0.8
SMAD6O43541 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMAD6O43541 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SMAD6O43541 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 AL596275.1-201ENST00000423464 877 ntBASIC20.07■□□□□ 0.8
SMAD6O43541 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.07■□□□□ 0.8
SMAD6O43541 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.07■□□□□ 0.8
SMAD6O43541 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.07■□□□□ 0.8
SMAD6O43541 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.07■□□□□ 0.8
SMAD6O43541 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMAD6O43541 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.06■□□□□ 0.8
SMAD6O43541 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
SMAD6O43541 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SMAD6O43541 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SMAD6O43541 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.06■□□□□ 0.8
SMAD6O43541 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms