Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPHP1O15259 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NPHP1O15259 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.01■■□□□ 1.59
NPHP1O15259 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
NPHP1O15259 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NPHP1O15259 TERF1P1-201ENST00000311003 1181 ntBASIC25.01■■□□□ 1.59
NPHP1O15259 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPHP1O15259 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.01■■□□□ 1.59
NPHP1O15259 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.01■■□□□ 1.59
NPHP1O15259 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.01■■□□□ 1.59
NPHP1O15259 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.01■■□□□ 1.59
NPHP1O15259 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.01■■□□□ 1.59
NPHP1O15259 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.01■■□□□ 1.59
NPHP1O15259 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.01■■□□□ 1.59
NPHP1O15259 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NPHP1O15259 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.01■■□□□ 1.59
NPHP1O15259 FBXW4P1-201ENST00000426721 2239 ntBASIC25.01■■□□□ 1.59
NPHP1O15259 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NPHP1O15259 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25■■□□□ 1.59
NPHP1O15259 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 AC116562.2-201ENST00000507042 360 ntBASIC25■■□□□ 1.59
NPHP1O15259 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
NPHP1O15259 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
NPHP1O15259 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25■■□□□ 1.59
NPHP1O15259 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPHP1O15259 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
NPHP1O15259 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.99■■□□□ 1.59
NPHP1O15259 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.99■■□□□ 1.59
NPHP1O15259 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
NPHP1O15259 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.99■■□□□ 1.59
NPHP1O15259 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.99■■□□□ 1.59
NPHP1O15259 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.99■■□□□ 1.59
NPHP1O15259 SLC25A3P1-201ENST00000443844 931 ntBASIC24.99■■□□□ 1.59
NPHP1O15259 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.99■■□□□ 1.59
NPHP1O15259 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.99■■□□□ 1.59
NPHP1O15259 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 AC010947.1-201ENST00000623454 693 ntBASIC24.99■■□□□ 1.59
NPHP1O15259 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHP1O15259 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.98■■□□□ 1.59
NPHP1O15259 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPHP1O15259 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
NPHP1O15259 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.98■■□□□ 1.59
NPHP1O15259 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPHP1O15259 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
NPHP1O15259 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NPHP1O15259 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.98■■□□□ 1.59
NPHP1O15259 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPHP1O15259 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NPHP1O15259 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
NPHP1O15259 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.98■■□□□ 1.59
NPHP1O15259 LIN28AP1-201ENST00000429574 405 ntBASIC24.98■■□□□ 1.59
NPHP1O15259 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.98■■□□□ 1.59
NPHP1O15259 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.98■■□□□ 1.59
NPHP1O15259 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.98■■□□□ 1.59
NPHP1O15259 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPHP1O15259 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPHP1O15259 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.98■■□□□ 1.59
NPHP1O15259 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPHP1O15259 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.97■■□□□ 1.59
NPHP1O15259 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.97■■□□□ 1.59
NPHP1O15259 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPHP1O15259 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.97■■□□□ 1.59
NPHP1O15259 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPHP1O15259 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.97■■□□□ 1.59
NPHP1O15259 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.97■■□□□ 1.59
NPHP1O15259 ATP5G1P1-201ENST00000448724 379 ntBASIC24.97■■□□□ 1.59
NPHP1O15259 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
NPHP1O15259 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
NPHP1O15259 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPHP1O15259 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.97■■□□□ 1.59
NPHP1O15259 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.97■■□□□ 1.59
NPHP1O15259 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.97■■□□□ 1.59
NPHP1O15259 AL031985.4-201ENST00000642138 673 ntBASIC24.97■■□□□ 1.59
NPHP1O15259 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.97■■□□□ 1.59
NPHP1O15259 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPHP1O15259 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPHP1O15259 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPHP1O15259 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
NPHP1O15259 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPHP1O15259 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.96■■□□□ 1.59
NPHP1O15259 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPHP1O15259 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
NPHP1O15259 AL024507.2-201ENST00000606070 2574 ntBASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms