Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.17■□□□□ 0.98
O00370 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
O00370 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.17■□□□□ 0.98
O00370 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
O00370 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
O00370 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.17■□□□□ 0.98
O00370 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.17■□□□□ 0.98
O00370 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
O00370 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
O00370 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
O00370 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.17■□□□□ 0.98
O00370 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
O00370 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
O00370 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.16■□□□□ 0.98
O00370 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
O00370 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
O00370 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
O00370 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.16■□□□□ 0.98
O00370 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.16■□□□□ 0.98
O00370 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.16■□□□□ 0.98
O00370 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.16■□□□□ 0.98
O00370 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
O00370 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
O00370 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.15■□□□□ 0.98
O00370 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
O00370 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.15■□□□□ 0.98
O00370 KRT16P6-202ENST00000425692 1426 ntBASIC21.15■□□□□ 0.98
O00370 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.15■□□□□ 0.98
O00370 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
O00370 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.15■□□□□ 0.98
O00370 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
O00370 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
O00370 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.15■□□□□ 0.98
O00370 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
O00370 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
O00370 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
O00370 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.15■□□□□ 0.98
O00370 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.15■□□□□ 0.98
O00370 SOX15-203ENST00000570788 1093 ntBASIC21.15■□□□□ 0.98
O00370 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.15■□□□□ 0.98
O00370 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
O00370 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
O00370 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
O00370 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
O00370 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
O00370 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
O00370 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.14■□□□□ 0.98
O00370 AL691432.2-201ENST00000607222 2038 ntBASIC21.14■□□□□ 0.98
O00370 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.14■□□□□ 0.97
O00370 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 CD99P1-205ENST00000527459 561 ntBASIC21.14■□□□□ 0.97
O00370 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
O00370 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.14■□□□□ 0.97
O00370 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.14■□□□□ 0.97
O00370 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
O00370 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
O00370 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.14■□□□□ 0.97
O00370 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
O00370 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.13■□□□□ 0.97
O00370 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 UNC93B4-201ENST00000505679 747 ntBASIC21.13■□□□□ 0.97
O00370 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.13■□□□□ 0.97
O00370 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.13■□□□□ 0.97
O00370 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.13■□□□□ 0.97
O00370 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.13■□□□□ 0.97
O00370 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
O00370 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
O00370 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.12■□□□□ 0.97
O00370 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
O00370 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.12■□□□□ 0.97
O00370 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms