Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
DFFAO00273 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.42■□□□□ 0.86
DFFAO00273 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
DFFAO00273 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DFFAO00273 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DFFAO00273 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DFFAO00273 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.42■□□□□ 0.86
DFFAO00273 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DFFAO00273 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DFFAO00273 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.41■□□□□ 0.86
DFFAO00273 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.41■□□□□ 0.86
DFFAO00273 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.41■□□□□ 0.86
DFFAO00273 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.41■□□□□ 0.86
DFFAO00273 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.41■□□□□ 0.86
DFFAO00273 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
DFFAO00273 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.41■□□□□ 0.86
DFFAO00273 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.41■□□□□ 0.86
DFFAO00273 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DFFAO00273 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.41■□□□□ 0.86
DFFAO00273 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DFFAO00273 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.41■□□□□ 0.86
DFFAO00273 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.4■□□□□ 0.86
DFFAO00273 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DFFAO00273 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.4■□□□□ 0.86
DFFAO00273 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.4■□□□□ 0.86
DFFAO00273 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.4■□□□□ 0.86
DFFAO00273 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.4■□□□□ 0.86
DFFAO00273 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
DFFAO00273 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.4■□□□□ 0.86
DFFAO00273 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DFFAO00273 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DFFAO00273 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
DFFAO00273 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.39■□□□□ 0.86
DFFAO00273 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
DFFAO00273 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DFFAO00273 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DFFAO00273 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DFFAO00273 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DFFAO00273 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DFFAO00273 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
DFFAO00273 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.39■□□□□ 0.85
DFFAO00273 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
DFFAO00273 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.39■□□□□ 0.85
DFFAO00273 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
DFFAO00273 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.39■□□□□ 0.85
DFFAO00273 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.39■□□□□ 0.85
DFFAO00273 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
DFFAO00273 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DFFAO00273 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
DFFAO00273 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.38■□□□□ 0.85
DFFAO00273 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
DFFAO00273 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.38■□□□□ 0.85
DFFAO00273 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DFFAO00273 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DFFAO00273 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DFFAO00273 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.38■□□□□ 0.85
DFFAO00273 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DFFAO00273 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DFFAO00273 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DFFAO00273 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.38■□□□□ 0.85
DFFAO00273 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.38■□□□□ 0.85
DFFAO00273 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.38■□□□□ 0.85
DFFAO00273 AC124283.5-201ENST00000624661 1809 ntBASIC20.38■□□□□ 0.85
DFFAO00273 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DFFAO00273 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms