Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 AC110285.6-201ENST00000617652 491 ntBASIC16.92■□□□□ 0.3
TMEM235A6NFC5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM235A6NFC5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 AL032819.2-201ENST00000624543 2162 ntBASIC16.91■□□□□ 0.3
TMEM235A6NFC5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 AC009237.14-201ENST00000609975 1594 ntBASIC16.91■□□□□ 0.3
TMEM235A6NFC5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM235A6NFC5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.9■□□□□ 0.3
TMEM235A6NFC5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM235A6NFC5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM235A6NFC5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TMEM235A6NFC5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms