Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 AF186192.3-201ENST00000583427 947 ntBASIC29.49■■■□□ 2.31
HFM1A2PYH4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 GOLGA6L3-201ENST00000507199 1679 ntBASIC29.48■■■□□ 2.31
HFM1A2PYH4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 SNORA78-201ENST00000459373 127 ntBASIC29.48■■■□□ 2.31
HFM1A2PYH4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 HTR7P1-201ENST00000538670 1336 ntBASIC29.48■■■□□ 2.31
HFM1A2PYH4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC29.48■■■□□ 2.31
HFM1A2PYH4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
HFM1A2PYH4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HFM1A2PYH4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HFM1A2PYH4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HFM1A2PYH4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
HFM1A2PYH4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
HFM1A2PYH4 AL353807.1-201ENST00000427475 662 ntBASIC29.47■■■□□ 2.31
HFM1A2PYH4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC29.47■■■□□ 2.31
HFM1A2PYH4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC29.47■■■□□ 2.31
HFM1A2PYH4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
HFM1A2PYH4 AC004264.1-201ENST00000608354 794 ntBASIC29.47■■■□□ 2.31
HFM1A2PYH4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
HFM1A2PYH4 TCF3P1-201ENST00000423021 1937 ntBASIC29.47■■■□□ 2.31
HFM1A2PYH4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC29.47■■■□□ 2.31
HFM1A2PYH4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC29.47■■■□□ 2.31
HFM1A2PYH4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HFM1A2PYH4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
HFM1A2PYH4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
HFM1A2PYH4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
HFM1A2PYH4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
HFM1A2PYH4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
HFM1A2PYH4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC29.46■■■□□ 2.31
HFM1A2PYH4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
HFM1A2PYH4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
HFM1A2PYH4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC29.46■■■□□ 2.31
HFM1A2PYH4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
HFM1A2PYH4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
HFM1A2PYH4 GOLGA2P11-201ENST00000562660 1621 ntBASIC29.46■■■□□ 2.31
HFM1A2PYH4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
HFM1A2PYH4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
HFM1A2PYH4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
HFM1A2PYH4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC29.45■■■□□ 2.31
HFM1A2PYH4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC29.45■■■□□ 2.31
HFM1A2PYH4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC29.45■■■□□ 2.31
HFM1A2PYH4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.31
HFM1A2PYH4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC29.45■■■□□ 2.31
HFM1A2PYH4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
HFM1A2PYH4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
HFM1A2PYH4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
HFM1A2PYH4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC29.45■■■□□ 2.3
HFM1A2PYH4 NIFKP9-201ENST00000419265 221 ntBASIC29.45■■■□□ 2.3
HFM1A2PYH4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC29.45■■■□□ 2.3
HFM1A2PYH4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC29.45■■■□□ 2.3
HFM1A2PYH4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC29.45■■■□□ 2.3
HFM1A2PYH4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC29.44■■■□□ 2.3
HFM1A2PYH4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
HFM1A2PYH4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC29.44■■■□□ 2.3
HFM1A2PYH4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
HFM1A2PYH4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
HFM1A2PYH4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
HFM1A2PYH4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC29.44■■■□□ 2.3
HFM1A2PYH4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC29.44■■■□□ 2.3
HFM1A2PYH4 AC009237.14-201ENST00000609975 1594 ntBASIC29.44■■■□□ 2.3
HFM1A2PYH4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC29.44■■■□□ 2.3
HFM1A2PYH4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
HFM1A2PYH4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC29.44■■■□□ 2.3
HFM1A2PYH4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
HFM1A2PYH4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
HFM1A2PYH4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
HFM1A2PYH4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
HFM1A2PYH4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms