Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 RBM17P2-201ENST00000616397 1405 ntBASIC17.3■□□□□ 0.36
SHISA3A0PJX4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SHISA3A0PJX4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 AC243732.1-201ENST00000612648 864 ntBASIC17.29■□□□□ 0.36
SHISA3A0PJX4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 AC018470.1-201ENST00000624790 3129 ntBASIC17.29■□□□□ 0.36
SHISA3A0PJX4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA3A0PJX4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 AL161938.1-201ENST00000569833 2180 ntBASIC17.28■□□□□ 0.36
SHISA3A0PJX4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.28■□□□□ 0.36
SHISA3A0PJX4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 AL358852.1-201ENST00000623174 1268 ntBASIC17.28■□□□□ 0.36
SHISA3A0PJX4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
SHISA3A0PJX4 RASA4CP-201ENST00000424092 1398 ntBASIC17.28■□□□□ 0.36
SHISA3A0PJX4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA3A0PJX4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms