Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 KRT18P68-201ENST00000392293 1000 ntBASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 AC137761.2-201ENST00000561729 223 ntBASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 AC145350.3-201ENST00000569033 163 ntBASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV9S1A1TA0A576 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV9S1A1TA0A576 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 AL032819.2-201ENST00000624543 2162 ntBASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 DUX4L16-201ENST00000555130 1264 ntBASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV9S1A1TA0A576 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV9S1A1TA0A576 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms