Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 MIR939-201ENST00000401314 82 ntBASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 AP001160.3-201ENST00000601484 763 ntBASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 AC106739.1-201ENST00000617035 715 ntBASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 AIRN-201ENST00000601203 4374 ntBASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUXBA0A1W2PPF3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 AC079598.2-202ENST00000546624 1451 ntBASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DUXBA0A1W2PPF3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 PBX2P1-201ENST00000493219 1291 ntBASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUXBA0A1W2PPF3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 AF213884.3-201ENST00000563833 479 ntBASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 AC104187.1-201ENST00000607510 612 ntBASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUXBA0A1W2PPF3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms