Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 AIRN-201ENST00000601203 4374 ntBASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 AC116351.2-201ENST00000606540 1585 ntBASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 MTDHP1-201ENST00000605323 784 ntBASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 LINC01521-201ENST00000504184 1943 ntBASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV25A0A0B4J276 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 AP001271.2-201ENST00000624018 1556 ntBASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV25A0A0B4J276 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 AL512408.1-201ENST00000569378 2000 ntBASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms