Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV19A0A0A6YYK7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV19A0A0A6YYK7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV19A0A0A6YYK7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRAV19A0A0A6YYK7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV19A0A0A6YYK7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV19A0A0A6YYK7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV19A0A0A6YYK7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRAV19A0A0A6YYK7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.58■□□□□ 0.88
TRAV19A0A0A6YYK7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 AC018553.1-201ENST00000616682 1458 ntBASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 AC087499.1-201ENST00000418141 1075 ntBASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV19A0A0A6YYK7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 TFP1-202ENST00000475455 1573 ntBASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 NIFKP9-201ENST00000419265 221 ntBASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 KSR1P1-201ENST00000446298 240 ntBASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 NUDT16P1-203ENST00000513809 620 ntBASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV19A0A0A6YYK7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 CR392000.1-201ENST00000624770 1228 ntBASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 AC133561.5-201ENST00000635547 218 ntBASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV19A0A0A6YYK7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 PHGDH-210ENST00000641115 1638 ntBASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 SMG8-203ENST00000578922 2178 ntBASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 YBX1P10-201ENST00000444752 975 ntBASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms