Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TCF3P1-201ENST00000423021 1937 ntBASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC006015.1-201ENST00000429970 570 ntBASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KRT18P61-201ENST00000585825 1298 ntBASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AP000974.1-201ENST00000623909 2387 ntBASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AL158211.5-201ENST00000623583 2518 ntBASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 BX323043.1-201ENST00000641006 1765 ntBASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SLC7A5P2-201ENST00000553010 536 ntBASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms