Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV27A0A087WT01 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV27A0A087WT01 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV27A0A087WT01 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 AIRN-201ENST00000601203 4374 ntBASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 AC010980.2-201ENST00000587099 1412 ntBASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV27A0A087WT01 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 AC009237.14-201ENST00000609975 1594 ntBASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 AC093484.2-201ENST00000580996 2166 ntBASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV27A0A087WT01 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV27A0A087WT01 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV27A0A087WT01 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV27A0A087WT01 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 AC093787.1-201ENST00000450396 207 ntBASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 AL589743.5-201ENST00000616611 1050 ntBASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV27A0A087WT01 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 KRT17P1-201ENST00000399211 1546 ntBASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 AC004911.1-201ENST00000416316 871 ntBASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 AC022517.1-201ENST00000592429 346 ntBASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 OR10C1-204ENST00000622521 1039 ntBASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV27A0A087WT01 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms