Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC073610.1-201ENST00000489971 396 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 RPL4P1-201ENST00000496596 1278 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC131392.1-201ENST00000506490 633 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC138866.2-201ENST00000508650 584 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ST13P12-201ENST00000508958 1094 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 GUSBP3-201ENST00000509348 423 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 GUSBP9-201ENST00000510138 584 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC074344.1-201ENST00000512823 224 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 RN7SKP298-201ENST00000515950 94 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AP001124.1-201ENST00000529628 385 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC006927.1-201ENST00000544818 498 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 OR11J2P-201ENST00000555298 907 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC109630.1-201ENST00000558846 730 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 LINC00556-201ENST00000569603 412 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC009120.7-201ENST00000623452 780 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 CLUHP10-201ENST00000631979 980 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC099654.14-201ENST00000638599 341 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 HLA-B-258ENST00000640615 240 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 HSPD1P1-201ENST00000503199 1726 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC016582.1-202ENST00000636341 2982 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL512504.2-201ENST00000445455 1909 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 Z99496.1-201ENST00000469424 1477 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 EEF1GP6-201ENST00000402309 905 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL590286.1-201ENST00000404178 291 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 TUBB4BP7-201ENST00000406999 1234 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 RPL21P32-201ENST00000419877 477 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 MTND3P23-201ENST00000431980 347 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 SEPT7P5-201ENST00000434048 306 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 RPS25P9-201ENST00000435591 252 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 HMGB1P45-201ENST00000435986 653 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 CYP2C58P-201ENST00000436281 475 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 WBP1LP7-201ENST00000437905 363 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL353072.1-201ENST00000446021 442 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC092634.4-203ENST00000451395 448 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 TMEM97P1-201ENST00000452969 451 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AL591866.1-201ENST00000456162 401 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 RN7SL337P-201ENST00000462468 301 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 HMGB1P36-201ENST00000487709 576 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 DYNLL1P6-201ENST00000503440 264 ntBASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.84□□□□□ -1.15
DEPDC4Q8N2C3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms