Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.9□□□□□ -1.46
H3F3AP84243 COL11A2P1-205ENST00000441798 676 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 AC236972.4-201ENST00000458091 963 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 RPL23AP64-201ENST00000469465 435 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.9□□□□□ -1.46
H3F3AP84243 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3F3AP84243 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.9□□□□□ -1.46
H3F3AP84243 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.9□□□□□ -1.46
H3F3AP84243 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.9□□□□□ -1.46
H3F3AP84243 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.9□□□□□ -1.46
H3F3AP84243 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.9□□□□□ -1.46
H3F3AP84243 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.9□□□□□ -1.46
H3F3AP84243 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3F3AP84243 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.9□□□□□ -1.46
H3F3AP84243 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.9□□□□□ -1.46
H3F3AP84243 AC073488.9-201ENST00000631601 754 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
H3F3AP84243 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
H3F3AP84243 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.9□□□□□ -1.47
H3F3AP84243 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
H3F3AP84243 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
H3F3AP84243 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
H3F3AP84243 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.9□□□□□ -1.47
H3F3AP84243 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
H3F3AP84243 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
H3F3AP84243 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.9□□□□□ -1.47
H3F3AP84243 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
H3F3AP84243 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
H3F3AP84243 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
H3F3AP84243 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.9□□□□□ -1.47
H3F3AP84243 AL139384.2-201ENST00000613809 3590 ntBASIC5.9□□□□□ -1.47
H3F3AP84243 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
H3F3AP84243 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
H3F3AP84243 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.89□□□□□ -1.47
H3F3AP84243 CASC19-228ENST00000641414 1684 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 OR7A2P-201ENST00000304105 930 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 RNU1-46P-201ENST00000384425 164 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 RNU4-64P-201ENST00000410795 131 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 RN7SKP205-201ENST00000410999 307 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 Z68868.1-201ENST00000429048 544 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.89□□□□□ -1.47
H3F3AP84243 CCNJP1-201ENST00000450600 1149 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.89□□□□□ -1.47
H3F3AP84243 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 OR52K3P-201ENST00000531655 943 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.89□□□□□ -1.47
H3F3AP84243 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.89□□□□□ -1.47
H3F3AP84243 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 OR7A11P-201ENST00000597719 953 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 AC036176.3-201ENST00000602456 418 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 AL953862.2-201ENST00000603089 820 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 BUB1P1-201ENST00000603541 607 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.89□□□□□ -1.47
H3F3AP84243 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 AC005899.6-201ENST00000620729 297 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 SNX18P10-201ENST00000625014 519 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.89□□□□□ -1.47
H3F3AP84243 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 AC025809.2-201ENST00000625085 1802 ntBASIC5.89□□□□□ -1.47
H3F3AP84243 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
H3F3AP84243 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
H3F3AP84243 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.89□□□□□ -1.47
H3F3AP84243 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
H3F3AP84243 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.88□□□□□ -1.47
H3F3AP84243 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 MARK2P4-201ENST00000503381 2380 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.88□□□□□ -1.47
H3F3AP84243 AC013488.1-201ENST00000526618 1838 ntBASIC5.88□□□□□ -1.47
H3F3AP84243 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
H3F3AP84243 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms