Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL355987.5-201ENST00000621585 411 ntBASIC7.79□□□□□ -1.16
RNF144AP50876 AC010338.1-201ENST00000621823 717 ntBASIC7.79□□□□□ -1.16
RNF144AP50876 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF144AP50876 MTND5P42-201ENST00000637720 498 ntBASIC7.79□□□□□ -1.16
RNF144AP50876 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF144AP50876 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF144AP50876 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF144AP50876 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF144AP50876 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RNF144AP50876 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
RNF144AP50876 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF144AP50876 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
RNF144AP50876 AC068044.1-201ENST00000441585 1978 ntBASIC7.79□□□□□ -1.16
RNF144AP50876 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RNF144AP50876 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF144AP50876 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF144AP50876 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 USP46-207ENST00000508499 1419 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC092111.2-201ENST00000611627 1414 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC096745.2-201ENST00000627783 1914 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF144AP50876 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 RNU4-73P-201ENST00000363164 141 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RN7SKP239-201ENST00000364814 295 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 Y_RNA.548-201ENST00000384656 105 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RPS3AP23-201ENST00000401762 784 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RPL21P107-201ENST00000411449 460 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AC098592.2-201ENST00000413158 265 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RPS26P38-201ENST00000414476 348 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RPL3P4-201ENST00000417615 423 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RPL21P111-201ENST00000418453 477 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC027644.1-201ENST00000419595 298 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF144AP50876 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 SNX18P4-201ENST00000456554 838 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AF186996.8-201ENST00000463158 907 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RN7SL580P-201ENST00000492489 287 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 RACK1-211ENST00000504726 388 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 ATP1B1P1-201ENST00000509767 915 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 LRRC34P2-201ENST00000514850 553 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RNA5SP159-201ENST00000517161 103 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF144AP50876 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC125611.2-201ENST00000551907 647 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 AC004825.1-201ENST00000555068 586 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF144AP50876 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF144AP50876 AC012146.2-201ENST00000576545 416 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF144AP50876 AC008536.2-201ENST00000607284 349 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AC099676.1-201ENST00000608886 657 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 AC135507.2-201ENST00000612443 309 ntBASIC7.78□□□□□ -1.16
RNF144AP50876 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF144AP50876 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms