Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
CPS1P31327 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CPS1P31327 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC9.09□□□□□ -0.95
CPS1P31327 RN7SKP115-201ENST00000363177 317 ntBASIC9.09□□□□□ -0.95
CPS1P31327 MIR1204-201ENST00000408388 67 ntBASIC9.09□□□□□ -0.95
CPS1P31327 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC9.09□□□□□ -0.95
CPS1P31327 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC9.09□□□□□ -0.95
CPS1P31327 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC9.09□□□□□ -0.95
CPS1P31327 ST13P12-201ENST00000508958 1094 ntBASIC9.09□□□□□ -0.95
CPS1P31327 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC9.09□□□□□ -0.95
CPS1P31327 AC122713.1-201ENST00000518368 1015 ntBASIC9.09□□□□□ -0.95
CPS1P31327 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC9.09□□□□□ -0.95
CPS1P31327 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC9.09□□□□□ -0.95
CPS1P31327 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 AL049840.5-201ENST00000602827 552 ntBASIC9.09□□□□□ -0.95
CPS1P31327 BUB1P1-201ENST00000603541 607 ntBASIC9.09□□□□□ -0.95
CPS1P31327 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC9.09□□□□□ -0.95
CPS1P31327 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC9.09□□□□□ -0.96
CPS1P31327 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC9.09□□□□□ -0.96
CPS1P31327 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
CPS1P31327 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC9.08□□□□□ -0.96
CPS1P31327 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
CPS1P31327 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
CPS1P31327 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CPS1P31327 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 TMSB4XP2-201ENST00000335179 210 ntBASIC9.08□□□□□ -0.96
CPS1P31327 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 AC006455.6-201ENST00000426192 893 ntBASIC9.08□□□□□ -0.96
CPS1P31327 MED28P4-201ENST00000433137 572 ntBASIC9.08□□□□□ -0.96
CPS1P31327 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC9.08□□□□□ -0.96
CPS1P31327 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC9.08□□□□□ -0.96
CPS1P31327 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC9.08□□□□□ -0.96
CPS1P31327 OR7A15P-201ENST00000449848 1009 ntBASIC9.08□□□□□ -0.96
CPS1P31327 RN7SL834P-201ENST00000461450 286 ntBASIC9.08□□□□□ -0.96
CPS1P31327 EIF3LP3-201ENST00000495197 822 ntBASIC9.08□□□□□ -0.96
CPS1P31327 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC9.08□□□□□ -0.96
CPS1P31327 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC9.08□□□□□ -0.96
CPS1P31327 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC9.08□□□□□ -0.96
CPS1P31327 MIR7155-201ENST00000615925 56 ntBASIC9.08□□□□□ -0.96
CPS1P31327 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC9.08□□□□□ -0.96
CPS1P31327 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC9.08□□□□□ -0.96
CPS1P31327 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC9.08□□□□□ -0.96
CPS1P31327 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC9.08□□□□□ -0.96
CPS1P31327 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC9.08□□□□□ -0.96
CPS1P31327 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CPS1P31327 AC011447.6-201ENST00000623510 2598 ntBASIC9.07□□□□□ -0.96
CPS1P31327 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
CPS1P31327 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC9.07□□□□□ -0.96
CPS1P31327 MALAT1-202ENST00000534336 8708 ntBASIC9.07□□□□□ -0.96
CPS1P31327 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
CPS1P31327 AL049697.3-201ENST00000406493 982 ntBASIC9.07□□□□□ -0.96
CPS1P31327 RPS3AP2-201ENST00000407190 754 ntBASIC9.07□□□□□ -0.96
CPS1P31327 RN7SKP281-201ENST00000410472 352 ntBASIC9.07□□□□□ -0.96
CPS1P31327 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC9.07□□□□□ -0.96
CPS1P31327 BX284632.2-201ENST00000421091 399 ntBASIC9.07□□□□□ -0.96
CPS1P31327 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC9.07□□□□□ -0.96
CPS1P31327 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC9.07□□□□□ -0.96
CPS1P31327 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC9.07□□□□□ -0.96
CPS1P31327 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC9.07□□□□□ -0.96
CPS1P31327 AP000648.1-201ENST00000529682 397 ntBASIC9.07□□□□□ -0.96
CPS1P31327 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC9.07□□□□□ -0.96
CPS1P31327 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CPS1P31327 OR10G5P-201ENST00000532733 358 ntBASIC9.07□□□□□ -0.96
CPS1P31327 MYL6-213ENST00000549017 502 ntTSL 3 BASIC9.07□□□□□ -0.96
CPS1P31327 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC9.07□□□□□ -0.96
CPS1P31327 AC104695.2-201ENST00000605056 775 ntBASIC9.07□□□□□ -0.96
CPS1P31327 AL031601.1-201ENST00000605702 394 ntBASIC9.07□□□□□ -0.96
CPS1P31327 AC010333.3-201ENST00000615100 402 ntBASIC9.07□□□□□ -0.96
CPS1P31327 AC037198.3-201ENST00000616754 526 ntBASIC9.07□□□□□ -0.96
CPS1P31327 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC9.07□□□□□ -0.96
CPS1P31327 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
CPS1P31327 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC9.07□□□□□ -0.96
CPS1P31327 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CPS1P31327 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
CPS1P31327 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
CPS1P31327 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CPS1P31327 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms