Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IGKV3OR2-5-201ENST00000605851 281 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 OR1X1P-201ENST00000606159 931 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC091304.9-201ENST00000612091 226 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 HSPD1P11-201ENST00000508643 1702 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC009090.4-201ENST00000623921 3691 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 MIR181A1-201ENST00000385026 110 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 TYMSP1-201ENST00000407851 869 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 FAM218BP-201ENST00000408897 458 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 RN7SKP139-201ENST00000410411 293 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 RN7SKP39-201ENST00000410773 322 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 RNU4-74P-201ENST00000411280 161 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 FUNDC2P4-201ENST00000441207 421 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC005099.1-201ENST00000442083 610 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 HMGB1P48-201ENST00000446155 598 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ST13P20-201ENST00000447996 1065 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 PHBP9-201ENST00000453578 825 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 OR9A3P-202ENST00000485185 878 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 RPS26P24-201ENST00000497656 331 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 SNRPCP8-201ENST00000514820 211 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 PGAM1P8-201ENST00000526979 453 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 OR4A21P-201ENST00000532759 944 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 NTS-203ENST00000551529 801 ntTSL 3 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC025198.1-201ENST00000578331 419 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC073534.1-201ENST00000598671 1056 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC083899.3-201ENST00000603413 594 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AL358335.3-201ENST00000604678 327 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC138904.2-201ENST00000614412 107 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC015871.5-202ENST00000623252 701 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 AC019080.5-201ENST00000624891 757 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.04□□□□□ -1.12
CUEDC1Q9NWM3 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms