Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
MTHFRP42898 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
MTHFRP42898 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.08□□□□□ -1.28
MTHFRP42898 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 RN7SKP47-201ENST00000365347 328 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 YWHAZP6-201ENST00000399764 738 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.08□□□□□ -1.28
MTHFRP42898 RANP6-201ENST00000413691 644 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.08□□□□□ -1.28
MTHFRP42898 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.08□□□□□ -1.28
MTHFRP42898 Z83838.1-202ENST00000456225 839 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 RN7SL39P-201ENST00000462264 297 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 RPL7AP23-201ENST00000482625 776 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.08□□□□□ -1.28
MTHFRP42898 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.08□□□□□ -1.28
MTHFRP42898 SYPL1P2-201ENST00000582878 727 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.08□□□□□ -1.28
MTHFRP42898 AL451064.2-201ENST00000623514 1654 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MTHFRP42898 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.08□□□□□ -1.28
MTHFRP42898 CUBNP3-201ENST00000457461 1784 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 AC092725.2-201ENST00000567658 1389 ntBASIC7.08□□□□□ -1.28
MTHFRP42898 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 AC099654.3-201ENST00000447087 1546 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.07□□□□□ -1.28
MTHFRP42898 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.07□□□□□ -1.28
MTHFRP42898 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
MTHFRP42898 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
MTHFRP42898 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 PPIAP24-201ENST00000328558 471 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.07□□□□□ -1.28
MTHFRP42898 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.07□□□□□ -1.28
MTHFRP42898 MORF4L1P5-201ENST00000433352 961 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 RBMY3AP-201ENST00000449381 1145 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.07□□□□□ -1.28
MTHFRP42898 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.07□□□□□ -1.28
MTHFRP42898 AC009879.1-201ENST00000520029 839 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 OR5D2P-201ENST00000524390 911 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 SAA3P-201ENST00000533267 365 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.07□□□□□ -1.28
MTHFRP42898 RPL41P2-201ENST00000544920 409 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.07□□□□□ -1.28
MTHFRP42898 DPPA3P2-202ENST00000557188 1219 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 AC023827.2-201ENST00000566880 1061 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 AC002519.2-203ENST00000567043 837 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 AL365181.4-201ENST00000609800 547 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 AL136097.3-201ENST00000611097 505 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
MTHFRP42898 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
MTHFRP42898 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
MTHFRP42898 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MTHFRP42898 AC009237.3-203ENST00000442128 3551 ntBASIC7.07□□□□□ -1.28
MTHFRP42898 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
MTHFRP42898 PSMC1P4-201ENST00000515236 1327 ntBASIC7.06□□□□□ -1.28
MTHFRP42898 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MTHFRP42898 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.06□□□□□ -1.28
MTHFRP42898 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.06□□□□□ -1.28
MTHFRP42898 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
MTHFRP42898 RNA5SP77-201ENST00000365394 120 ntBASIC7.06□□□□□ -1.28
MTHFRP42898 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.06□□□□□ -1.28
MTHFRP42898 CYCSP17-201ENST00000407870 315 ntBASIC7.06□□□□□ -1.28
MTHFRP42898 AC108479.1-201ENST00000431142 427 ntBASIC7.06□□□□□ -1.28
MTHFRP42898 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.06□□□□□ -1.28
MTHFRP42898 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.06□□□□□ -1.28
MTHFRP42898 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MTHFRP42898 RPL26P30-201ENST00000453533 435 ntBASIC7.06□□□□□ -1.28
MTHFRP42898 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.06□□□□□ -1.28
MTHFRP42898 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.06□□□□□ -1.28
MTHFRP42898 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.06□□□□□ -1.28
MTHFRP42898 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.06□□□□□ -1.28
MTHFRP42898 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MTHFRP42898 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms