Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.29□□□□□ -1.08
COL15A1P39059 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.29□□□□□ -1.08
COL15A1P39059 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.29□□□□□ -1.08
COL15A1P39059 SNX18P24-201ENST00000505249 671 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 OR7E99P-201ENST00000505750 922 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 AC024451.1-201ENST00000508013 779 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC012146.2-201ENST00000576545 416 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC8.29□□□□□ -1.08
COL15A1P39059 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
COL15A1P39059 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
COL15A1P39059 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC007485.2-201ENST00000623493 1667 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
COL15A1P39059 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.29□□□□□ -1.08
COL15A1P39059 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 AC127024.8-201ENST00000623719 2094 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
COL15A1P39059 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
COL15A1P39059 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.28□□□□□ -1.08
COL15A1P39059 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
COL15A1P39059 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
COL15A1P39059 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 AC007993.1-201ENST00000621298 2430 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 RPL6P21-201ENST00000418672 846 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 IPPKP1-201ENST00000422501 768 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC8.28□□□□□ -1.08
COL15A1P39059 AC094019.1-201ENST00000434678 472 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.28□□□□□ -1.08
COL15A1P39059 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.28□□□□□ -1.08
COL15A1P39059 RN7SL561P-201ENST00000488553 281 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.28□□□□□ -1.08
COL15A1P39059 TRIM77BP-201ENST00000524985 1119 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.28□□□□□ -1.08
COL15A1P39059 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 AL356986.1-201ENST00000604085 341 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 MAPK10-365ENST00000641902 3825 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.28□□□□□ -1.08
COL15A1P39059 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.28□□□□□ -1.08
COL15A1P39059 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
COL15A1P39059 AC092111.1-201ENST00000618256 3358 ntBASIC8.28□□□□□ -1.08
COL15A1P39059 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.28□□□□□ -1.08
COL15A1P39059 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.27□□□□□ -1.08
COL15A1P39059 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.08
COL15A1P39059 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
COL15A1P39059 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
COL15A1P39059 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.27□□□□□ -1.09
COL15A1P39059 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8.27□□□□□ -1.09
COL15A1P39059 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
COL15A1P39059 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.27□□□□□ -1.09
COL15A1P39059 AC010240.2-201ENST00000445363 1205 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 AC097463.1-201ENST00000447288 481 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC8.27□□□□□ -1.09
COL15A1P39059 SETP20-201ENST00000457046 852 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 LSM3P4-201ENST00000502948 309 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.27□□□□□ -1.09
COL15A1P39059 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.27□□□□□ -1.09
COL15A1P39059 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.27□□□□□ -1.09
COL15A1P39059 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.27□□□□□ -1.09
COL15A1P39059 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC8.27□□□□□ -1.09
COL15A1P39059 AC233699.1-201ENST00000569955 1168 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 RN7SL475P-201ENST00000583379 298 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.27□□□□□ -1.09
COL15A1P39059 AC024884.1-201ENST00000620583 399 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 AP001264.1-201ENST00000620602 703 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
COL15A1P39059 CLCA3P-203ENST00000490028 2781 ntBASIC8.27□□□□□ -1.09
COL15A1P39059 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms