Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPL26P30-201ENST00000453533 435 ntBASIC6.04□□□□□ -1.44
SHC1P29353 AC099340.1-201ENST00000475247 599 ntBASIC6.04□□□□□ -1.44
SHC1P29353 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHC1P29353 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.04□□□□□ -1.44
SHC1P29353 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.04□□□□□ -1.44
SHC1P29353 AC026774.2-201ENST00000513990 1098 ntBASIC6.04□□□□□ -1.44
SHC1P29353 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHC1P29353 AL445383.1-201ENST00000554689 874 ntBASIC6.04□□□□□ -1.44
SHC1P29353 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.04□□□□□ -1.44
SHC1P29353 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.04□□□□□ -1.44
SHC1P29353 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.04□□□□□ -1.44
SHC1P29353 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.04□□□□□ -1.44
SHC1P29353 AC011497.2-201ENST00000600255 639 ntBASIC6.04□□□□□ -1.44
SHC1P29353 DIMT1P1-201ENST00000603970 763 ntBASIC6.04□□□□□ -1.44
SHC1P29353 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.04□□□□□ -1.44
SHC1P29353 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SHC1P29353 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.04□□□□□ -1.44
SHC1P29353 FANCD2P2-201ENST00000437591 1400 ntBASIC6.04□□□□□ -1.44
SHC1P29353 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SHC1P29353 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHC1P29353 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHC1P29353 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHC1P29353 AP003486.1-201ENST00000525716 3994 ntBASIC6.04□□□□□ -1.44
SHC1P29353 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.04□□□□□ -1.44
SHC1P29353 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHC1P29353 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHC1P29353 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.03□□□□□ -1.44
SHC1P29353 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 RNA5SP308-201ENST00000362532 115 ntBASIC6.03□□□□□ -1.44
SHC1P29353 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.03□□□□□ -1.44
SHC1P29353 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 FDPSP5-201ENST00000399474 1057 ntBASIC6.03□□□□□ -1.44
SHC1P29353 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 RN7SKP188-201ENST00000410789 317 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AL663061.1-201ENST00000416625 580 ntBASIC6.03□□□□□ -1.44
SHC1P29353 CDC42P6-201ENST00000421246 576 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.03□□□□□ -1.44
SHC1P29353 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.03□□□□□ -1.44
SHC1P29353 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 GAPDHP20-201ENST00000444107 1007 ntBASIC6.03□□□□□ -1.44
SHC1P29353 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.03□□□□□ -1.44
SHC1P29353 AC022080.2-201ENST00000452932 533 ntBASIC6.03□□□□□ -1.44
SHC1P29353 RPL31P11-202ENST00000454082 372 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 AC117395.1-201ENST00000487390 403 ntBASIC6.03□□□□□ -1.44
SHC1P29353 RPL5P33-201ENST00000487833 905 ntBASIC6.03□□□□□ -1.44
SHC1P29353 RPL12P7-201ENST00000493832 494 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.03□□□□□ -1.44
SHC1P29353 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
SHC1P29353 OR52H2P-201ENST00000514607 902 ntBASIC6.03□□□□□ -1.44
SHC1P29353 RNA5SP116-201ENST00000516132 98 ntBASIC6.03□□□□□ -1.44
SHC1P29353 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 CHEK2P2-201ENST00000554701 672 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.03□□□□□ -1.44
SHC1P29353 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.03□□□□□ -1.44
SHC1P29353 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.03□□□□□ -1.44
SHC1P29353 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC091304.4-201ENST00000565703 620 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 AC027796.1-201ENST00000575593 512 ntBASIC6.03□□□□□ -1.44
SHC1P29353 RPL29P33-201ENST00000587474 316 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC011921.2-201ENST00000589465 152 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.03□□□□□ -1.44
SHC1P29353 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC005899.6-201ENST00000620729 297 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC005514.1-201ENST00000623521 208 ntBASIC6.03□□□□□ -1.44
SHC1P29353 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHC1P29353 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.03□□□□□ -1.44
SHC1P29353 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 OR5M2P-202ENST00000641241 4242 ntBASIC6.03□□□□□ -1.44
SHC1P29353 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHC1P29353 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SHC1P29353 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHC1P29353 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SHC1P29353 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
SHC1P29353 PSMC1P6-201ENST00000477233 1319 ntBASIC6.02□□□□□ -1.45
SHC1P29353 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHC1P29353 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.02□□□□□ -1.45
SHC1P29353 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.02□□□□□ -1.45
SHC1P29353 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHC1P29353 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms