Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC002486.2-201ENST00000447806 590 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 GOT2P2-201ENST00000450663 1251 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.35□□□□□ -1.23
PTPN1P18031 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.35□□□□□ -1.23
PTPN1P18031 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.35□□□□□ -1.23
PTPN1P18031 AC010468.3-201ENST00000508225 458 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.35□□□□□ -1.23
PTPN1P18031 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 EEF1B2P2-201ENST00000519625 676 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 PPIAP6-201ENST00000557078 499 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 AC084759.1-201ENST00000561168 290 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.35□□□□□ -1.23
PTPN1P18031 AC010287.1-201ENST00000566916 357 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 AC007255.2-201ENST00000604053 631 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 AC111186.1-201ENST00000604684 130 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 KATNBL1P5-201ENST00000605015 517 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.35□□□□□ -1.23
PTPN1P18031 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 AC009220.2-201ENST00000489759 1751 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 DDX43P1-201ENST00000510713 1763 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.35□□□□□ -1.23
PTPN1P18031 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PTPN1P18031 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.35□□□□□ -1.23
PTPN1P18031 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.35□□□□□ -1.23
PTPN1P18031 AC068733.2-201ENST00000605434 1418 ntBASIC7.35□□□□□ -1.23
PTPN1P18031 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.35□□□□□ -1.23
PTPN1P18031 AC123769.2-201ENST00000624332 5984 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 AC020978.6-201ENST00000571197 3177 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 NCOA4P3-201ENST00000513203 1877 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 AC110792.3-201ENST00000595906 1614 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 SPATA31C1-201ENST00000420021 3895 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
PTPN1P18031 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 RPLP1P10-201ENST00000413972 339 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.34□□□□□ -1.23
PTPN1P18031 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PTPN1P18031 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.34□□□□□ -1.23
PTPN1P18031 RN7SL372P-201ENST00000461982 298 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 RN7SL390P-201ENST00000470634 284 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 RN7SL655P-201ENST00000486087 298 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 AC009879.1-201ENST00000520029 839 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 YWHAZP1-201ENST00000556286 722 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.34□□□□□ -1.23
PTPN1P18031 MIR4312-201ENST00000579909 76 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.34□□□□□ -1.23
PTPN1P18031 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 AL445435.1-201ENST00000604232 665 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 AL355802.4-201ENST00000607635 548 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 MRPL57P3-201ENST00000619218 176 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 AC073342.3-201ENST00000624211 193 ntBASIC7.34□□□□□ -1.23
PTPN1P18031 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
PTPN1P18031 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.34□□□□□ -1.23
PTPN1P18031 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PTPN1P18031 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
PTPN1P18031 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms