Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RN7SL393P-201ENST00000463588 296 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 RN7SL83P-201ENST00000468131 297 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMK2P53671 RPL23AP68-201ENST00000480924 445 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 RN7SL741P-201ENST00000482473 289 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 AC083906.1-201ENST00000509298 406 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMK2P53671 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMK2P53671 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.7□□□□□ -1.34
LIMK2P53671 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.7□□□□□ -1.34
LIMK2P53671 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LIMK2P53671 AC244034.2-201ENST00000562504 509 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMK2P53671 RN7SL270P-201ENST00000579643 281 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMK2P53671 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.7□□□□□ -1.34
LIMK2P53671 RPL7AP69-201ENST00000595306 806 ntBASIC6.7□□□□□ -1.34
LIMK2P53671 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.7□□□□□ -1.34
LIMK2P53671 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMK2P53671 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMK2P53671 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.7□□□□□ -1.34
LIMK2P53671 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
LIMK2P53671 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.7□□□□□ -1.34
LIMK2P53671 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.7□□□□□ -1.34
LIMK2P53671 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LIMK2P53671 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LIMK2P53671 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LIMK2P53671 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LIMK2P53671 AC022034.1-201ENST00000512867 2156 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
LIMK2P53671 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LIMK2P53671 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.69□□□□□ -1.34
LIMK2P53671 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
LIMK2P53671 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
LIMK2P53671 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
LIMK2P53671 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LIMK2P53671 AC121334.1-201ENST00000396414 802 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 OOSP1-201ENST00000398992 1270 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.69□□□□□ -1.34
LIMK2P53671 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.69□□□□□ -1.34
LIMK2P53671 GAPDHP57-201ENST00000424400 585 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 AL596268.1-201ENST00000427910 1048 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 PAICSP2-201ENST00000429118 1150 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 RPL23AP28-201ENST00000448062 470 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 RN7SL216P-201ENST00000471607 298 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.69□□□□□ -1.34
LIMK2P53671 SNX18P23-201ENST00000510867 677 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 IGKV2D-38-201ENST00000518423 240 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 AC140063.1-201ENST00000541343 259 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.69□□□□□ -1.34
LIMK2P53671 PPIAP6-201ENST00000557078 499 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.69□□□□□ -1.34
LIMK2P53671 AC011921.2-201ENST00000589465 152 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 AC009779.8-202ENST00000607990 932 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 AC005858.3-201ENST00000624756 589 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 AC022507.1-201ENST00000548349 1505 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.69□□□□□ -1.34
LIMK2P53671 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
LIMK2P53671 AC092701.1-201ENST00000623627 1551 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 OR2AH1P-202ENST00000641232 2744 ntBASIC6.69□□□□□ -1.34
LIMK2P53671 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LIMK2P53671 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LIMK2P53671 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.68□□□□□ -1.34
LIMK2P53671 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 OR56A4-201ENST00000330728 1209 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 AL031681.1-201ENST00000443304 400 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.68□□□□□ -1.34
LIMK2P53671 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 RN7SL70P-201ENST00000478322 302 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 RN7SL649P-201ENST00000496974 275 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 FTH1P8-201ENST00000498161 514 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LIMK2P53671 AC253576.1-201ENST00000511645 1156 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms