Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL4A5P29400 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL4A5P29400 AC011592.1-201ENST00000624647 3634 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
COL4A5P29400 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
COL4A5P29400 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.62□□□□□ -1.19
COL4A5P29400 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.62□□□□□ -1.19
COL4A5P29400 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 OR9K1P-201ENST00000326513 941 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 MIR1204-201ENST00000408388 67 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 BX119917.1-201ENST00000432517 502 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.62□□□□□ -1.19
COL4A5P29400 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.62□□□□□ -1.19
COL4A5P29400 RN7SL705P-201ENST00000481678 294 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.62□□□□□ -1.19
COL4A5P29400 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.62□□□□□ -1.19
COL4A5P29400 AL121579.2-201ENST00000555466 590 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 AC007225.2-201ENST00000562529 256 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 AC010547.6-201ENST00000571789 193 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.62□□□□□ -1.19
COL4A5P29400 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.62□□□□□ -1.19
COL4A5P29400 AC004948.1-201ENST00000609858 672 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 AC096708.4-201ENST00000620563 552 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.62□□□□□ -1.19
COL4A5P29400 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
COL4A5P29400 AC104964.2-201ENST00000562242 4641 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 AC007485.2-201ENST00000623493 1667 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 CASC19-228ENST00000641414 1684 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 FLJ42393-201ENST00000623801 2270 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.62□□□□□ -1.19
COL4A5P29400 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL4A5P29400 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
COL4A5P29400 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL4A5P29400 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
COL4A5P29400 AC007993.1-201ENST00000621298 2430 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 RNU1-49P-201ENST00000363468 159 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 AL132875.1-201ENST00000403623 949 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 EEF1B2P8-201ENST00000414101 671 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.61□□□□□ -1.19
COL4A5P29400 AC021269.1-201ENST00000526860 705 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.61□□□□□ -1.19
COL4A5P29400 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.61□□□□□ -1.19
COL4A5P29400 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.61□□□□□ -1.19
COL4A5P29400 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.61□□□□□ -1.19
COL4A5P29400 MIR6793-201ENST00000612376 63 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 MIR6798-201ENST00000612887 67 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 AC069234.4-201ENST00000621276 412 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 AC012653.2-201ENST00000621880 420 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL4A5P29400 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 UGT2B25P-201ENST00000511504 1586 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.61□□□□□ -1.19
COL4A5P29400 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.61□□□□□ -1.19
COL4A5P29400 NHS-204ENST00000615422 8860 ntTSL 5 BASIC7.61□□□□□ -1.19
COL4A5P29400 AC011455.2-201ENST00000599320 3336 ntBASIC7.61□□□□□ -1.19
COL4A5P29400 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.61□□□□□ -1.19
COL4A5P29400 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL4A5P29400 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.6□□□□□ -1.19
COL4A5P29400 AC007394.1-201ENST00000421941 531 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 RPS27AP2-201ENST00000457576 465 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 SNORA26.10-201ENST00000516427 141 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 IGHV3-57-201ENST00000520143 280 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.6□□□□□ -1.19
COL4A5P29400 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.6□□□□□ -1.19
COL4A5P29400 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.6□□□□□ -1.19
COL4A5P29400 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
COL4A5P29400 AC022325.1-201ENST00000502748 2199 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.6□□□□□ -1.19
COL4A5P29400 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms